Gene : Araha.21546s0001 A. halleri v1.1

Defline:  (1 of 5) PTHR10263:SF13 - V-TYPE PROTON ATPASE 16 KDA PROTEOLIPID SUBUNIT C4 Genomic Order:  1
Name:  ? Araha.21546s0001 Secondary Identifier:  ? PAC:28858870

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.21546s0001 0.5kb upstream 0.5kb upstream 999 true Scaffold21546: 203-1201 Arabidopsis halleri
Araha.21546s0001 0.5kb upstream 0.5kb upstream 189 false Scaffold21546: 1013-1201 Arabidopsis halleri
Araha.21546s0001 0.5kb downstream 0.5kb downstream 1012 true Scaffold21546: 1-1012 Arabidopsis halleri
Araha.21546s0001 0.5kb downstream 0.5kb downstream 202 false Scaffold21546: 1-202 Arabidopsis halleri
Araha.21546s0001 1.0kb upstream 1.0kb upstream 999 true Scaffold21546: 203-1201 Arabidopsis halleri
Araha.21546s0001 1.0kb upstream 1.0kb upstream 189 false Scaffold21546: 1013-1201 Arabidopsis halleri
Araha.21546s0001 1.0kb downstream 1.0kb downstream 1012 true Scaffold21546: 1-1012 Arabidopsis halleri
Araha.21546s0001 1.0kb downstream 1.0kb downstream 202 false Scaffold21546: 1-202 Arabidopsis halleri
Araha.21546s0001 2.0kb upstream 2.0kb upstream 999 true Scaffold21546: 203-1201 Arabidopsis halleri
Araha.21546s0001 2.0kb upstream 2.0kb upstream 189 false Scaffold21546: 1013-1201 Arabidopsis halleri
Araha.21546s0001 2.0kb downstream 2.0kb downstream 1012 true Scaffold21546: 1-1012 Arabidopsis halleri
Araha.21546s0001 2.0kb downstream 2.0kb downstream 202 false Scaffold21546: 1-202 Arabidopsis halleri
Araha.21546s0001 5.0kb upstream 5.0kb upstream 999 true Scaffold21546: 203-1201 Arabidopsis halleri
Araha.21546s0001 5.0kb upstream 5.0kb upstream 189 false Scaffold21546: 1013-1201 Arabidopsis halleri
Araha.21546s0001 5.0kb downstream 5.0kb downstream 1012 true Scaffold21546: 1-1012 Arabidopsis halleri
Araha.21546s0001 5.0kb downstream 5.0kb downstream 202 false Scaffold21546: 1-202 Arabidopsis halleri
Araha.21546s0001 10.0kb upstream 10.0kb upstream 999 true Scaffold21546: 203-1201 Arabidopsis halleri
Araha.21546s0001 10.0kb upstream 10.0kb upstream 189 false Scaffold21546: 1013-1201 Arabidopsis halleri
Araha.21546s0001 10.0kb downstream 10.0kb downstream 1012 true Scaffold21546: 1-1012 Arabidopsis halleri
Araha.21546s0001 10.0kb downstream 10.0kb downstream 202 false Scaffold21546: 1-202 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379842 5261 Brassicaceae View MSA
123840555 5264 Brassicales-Malvales View MSA
124343812 5266 SBM View MSA
124250754 5268 Malvidae View MSA
124071141 5270 Rosid View MSA
123751721 5271 Pentapetalae View MSA
122796043 5272 Eudicot View MSA
122048360 5273 Angiosperm View MSA
121348011 5274 Embryophyte View MSA
123424193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain