Gene : Araha.23420s0005 A. halleri v1.1
Defline:  (1 of 3) PTHR11969:SF29 - TRANSCRIPTION FACTOR BHLH57-RELATED Genomic Order:  5
Name:  ? Araha.23420s0005 Secondary Identifier:  ? PAC:28848075
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.23420s0005 0.5kb upstream 0.5kb upstream 2664 true Scaffold23420: 21643-24306 Arabidopsis halleri
Araha.23420s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold23420: 23807-24306 Arabidopsis halleri
Araha.23420s0005 0.5kb downstream 0.5kb downstream 2664 true Scaffold23420: 21143-23806 Arabidopsis halleri
Araha.23420s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold23420: 21143-21642 Arabidopsis halleri
Araha.23420s0005 1.0kb upstream 1.0kb upstream 3164 true Scaffold23420: 21643-24806 Arabidopsis halleri
Araha.23420s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold23420: 23807-24806 Arabidopsis halleri
Araha.23420s0005 1.0kb downstream 1.0kb downstream 3164 true Scaffold23420: 20643-23806 Arabidopsis halleri
Araha.23420s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold23420: 20643-21642 Arabidopsis halleri
Araha.23420s0005 2.0kb upstream 2.0kb upstream 4164 true Scaffold23420: 21643-25806 Arabidopsis halleri
Araha.23420s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold23420: 23807-25806 Arabidopsis halleri
Araha.23420s0005 2.0kb downstream 2.0kb downstream 4164 true Scaffold23420: 19643-23806 Arabidopsis halleri
Araha.23420s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold23420: 19643-21642 Arabidopsis halleri
Araha.23420s0005 5.0kb upstream 5.0kb upstream 7164 true Scaffold23420: 21643-28806 Arabidopsis halleri
Araha.23420s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold23420: 23807-28806 Arabidopsis halleri
Araha.23420s0005 5.0kb downstream 5.0kb downstream 7164 true Scaffold23420: 16643-23806 Arabidopsis halleri
Araha.23420s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold23420: 16643-21642 Arabidopsis halleri
Araha.23420s0005 10.0kb upstream 10.0kb upstream 12164 true Scaffold23420: 21643-33806 Arabidopsis halleri
Araha.23420s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold23420: 23807-33806 Arabidopsis halleri
Araha.23420s0005 10.0kb downstream 10.0kb downstream 12164 true Scaffold23420: 11643-23806 Arabidopsis halleri
Araha.23420s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold23420: 11643-21642 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372386 5261 Brassicaceae View MSA
123800351 5264 Brassicales-Malvales View MSA
124297770 5266 SBM View MSA
124245244 5268 Malvidae View MSA
124067472 5270 Rosid View MSA
123749285 5271 Pentapetalae View MSA
122794835 5272 Eudicot View MSA
122051154 5273 Angiosperm View MSA
121350598 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain