Gene : Araha.23388s0001 A. halleri v1.1
Defline:  (1 of 1) 5.3.1.23 - S-methyl-5-thioribose-1-phosphate isomerase / S-methyl-5-thio-D-ribose-1-phosphate aldose-ketose-isomerase Genomic Order:  1
Name:  ? Araha.23388s0001 Secondary Identifier:  ? PAC:28841438
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-4361 Arabidopsis halleri pathologic  
Ahalleri PWY-7270 Arabidopsis halleri pathologic  
Ahalleri PWY-7528 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.23388s0001 0.5kb upstream 0.5kb upstream 2763 true Scaffold23388: 4201-6963 Arabidopsis halleri
Araha.23388s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold23388: 4201-4700 Arabidopsis halleri
Araha.23388s0001 0.5kb downstream 0.5kb downstream 2721 true Scaffold23388: 4701-7421 Arabidopsis halleri
Araha.23388s0001 0.5kb downstream 0.5kb downstream 458 false Scaffold23388: 6964-7421 Arabidopsis halleri
Araha.23388s0001 1.0kb upstream 1.0kb upstream 3263 true Scaffold23388: 3701-6963 Arabidopsis halleri
Araha.23388s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold23388: 3701-4700 Arabidopsis halleri
Araha.23388s0001 1.0kb downstream 1.0kb downstream 2721 true Scaffold23388: 4701-7421 Arabidopsis halleri
Araha.23388s0001 1.0kb downstream 1.0kb downstream 458 false Scaffold23388: 6964-7421 Arabidopsis halleri
Araha.23388s0001 2.0kb upstream 2.0kb upstream 4263 true Scaffold23388: 2701-6963 Arabidopsis halleri
Araha.23388s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold23388: 2701-4700 Arabidopsis halleri
Araha.23388s0001 2.0kb downstream 2.0kb downstream 2721 true Scaffold23388: 4701-7421 Arabidopsis halleri
Araha.23388s0001 2.0kb downstream 2.0kb downstream 458 false Scaffold23388: 6964-7421 Arabidopsis halleri
Araha.23388s0001 5.0kb upstream 5.0kb upstream 6963 true Scaffold23388: 1-6963 Arabidopsis halleri
Araha.23388s0001 5.0kb upstream 5.0kb upstream 4700 false Scaffold23388: 1-4700 Arabidopsis halleri
Araha.23388s0001 5.0kb downstream 5.0kb downstream 2721 true Scaffold23388: 4701-7421 Arabidopsis halleri
Araha.23388s0001 5.0kb downstream 5.0kb downstream 458 false Scaffold23388: 6964-7421 Arabidopsis halleri
Araha.23388s0001 10.0kb upstream 10.0kb upstream 6963 true Scaffold23388: 1-6963 Arabidopsis halleri
Araha.23388s0001 10.0kb upstream 10.0kb upstream 4700 false Scaffold23388: 1-4700 Arabidopsis halleri
Araha.23388s0001 10.0kb downstream 10.0kb downstream 2721 true Scaffold23388: 4701-7421 Arabidopsis halleri
Araha.23388s0001 10.0kb downstream 10.0kb downstream 458 false Scaffold23388: 6964-7421 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360311 5261 Brassicaceae View MSA
123829438 5264 Brassicales-Malvales View MSA
124345905 5266 SBM View MSA
124238790 5268 Malvidae View MSA
124060423 5270 Rosid View MSA
123740094 5271 Pentapetalae View MSA
122788864 5272 Eudicot View MSA
122043863 5273 Angiosperm View MSA
121310201 5274 Embryophyte View MSA
123428305 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain