Gene : Araha.23046s0007 A. halleri v1.1

Defline:  (1 of 8) PF14309//PF14383 - Domain of unknown function (DUF4378) (DUF4378) // DUF761-associated sequence motif (VARLMGL) Genomic Order:  7
Name:  ? Araha.23046s0007 Secondary Identifier:  ? PAC:28855037

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.23046s0007 0.5kb upstream 0.5kb upstream 3032 true Scaffold23046: 31280-34311 Arabidopsis halleri
Araha.23046s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold23046: 31280-31779 Arabidopsis halleri
Araha.23046s0007 0.5kb downstream 0.5kb downstream 3032 true Scaffold23046: 31780-34811 Arabidopsis halleri
Araha.23046s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold23046: 34312-34811 Arabidopsis halleri
Araha.23046s0007 1.0kb upstream 1.0kb upstream 3532 true Scaffold23046: 30780-34311 Arabidopsis halleri
Araha.23046s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold23046: 30780-31779 Arabidopsis halleri
Araha.23046s0007 1.0kb downstream 1.0kb downstream 3532 true Scaffold23046: 31780-35311 Arabidopsis halleri
Araha.23046s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold23046: 34312-35311 Arabidopsis halleri
Araha.23046s0007 2.0kb upstream 2.0kb upstream 4532 true Scaffold23046: 29780-34311 Arabidopsis halleri
Araha.23046s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold23046: 29780-31779 Arabidopsis halleri
Araha.23046s0007 2.0kb downstream 2.0kb downstream 4532 true Scaffold23046: 31780-36311 Arabidopsis halleri
Araha.23046s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold23046: 34312-36311 Arabidopsis halleri
Araha.23046s0007 5.0kb upstream 5.0kb upstream 7532 true Scaffold23046: 26780-34311 Arabidopsis halleri
Araha.23046s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold23046: 26780-31779 Arabidopsis halleri
Araha.23046s0007 5.0kb downstream 5.0kb downstream 7287 true Scaffold23046: 31780-39066 Arabidopsis halleri
Araha.23046s0007 5.0kb downstream 5.0kb downstream 4755 false Scaffold23046: 34312-39066 Arabidopsis halleri
Araha.23046s0007 10.0kb upstream 10.0kb upstream 12532 true Scaffold23046: 21780-34311 Arabidopsis halleri
Araha.23046s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold23046: 21780-31779 Arabidopsis halleri
Araha.23046s0007 10.0kb downstream 10.0kb downstream 7287 true Scaffold23046: 31780-39066 Arabidopsis halleri
Araha.23046s0007 10.0kb downstream 10.0kb downstream 4755 false Scaffold23046: 34312-39066 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377696 5261 Brassicaceae View MSA
123801606 5264 Brassicales-Malvales View MSA
124298886 5266 SBM View MSA
124150427 5268 Malvidae View MSA
124062054 5270 Rosid View MSA
123749389 5271 Pentapetalae View MSA
122793525 5272 Eudicot View MSA
122045763 5273 Angiosperm View MSA
121310498 5274 Embryophyte View MSA
123347966 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain