Gene : Araha.23330s0012 A. halleri v1.1
Defline:  (1 of 1) PF13249 - Squalene-hopene cyclase N-terminal domain (SQHop_cyclase_N) Genomic Order:  12
Name:  ? Araha.23330s0012 Secondary Identifier:  ? PAC:28851152
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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.23330s0012 0.5kb upstream 0.5kb upstream 4019 true Scaffold23330: 37856-41874 Arabidopsis halleri
Araha.23330s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold23330: 41375-41874 Arabidopsis halleri
Araha.23330s0012 0.5kb downstream 0.5kb downstream 4019 true Scaffold23330: 37356-41374 Arabidopsis halleri
Araha.23330s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold23330: 37356-37855 Arabidopsis halleri
Araha.23330s0012 1.0kb upstream 1.0kb upstream 4519 true Scaffold23330: 37856-42374 Arabidopsis halleri
Araha.23330s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold23330: 41375-42374 Arabidopsis halleri
Araha.23330s0012 1.0kb downstream 1.0kb downstream 4519 true Scaffold23330: 36856-41374 Arabidopsis halleri
Araha.23330s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold23330: 36856-37855 Arabidopsis halleri
Araha.23330s0012 2.0kb upstream 2.0kb upstream 5473 true Scaffold23330: 37856-43328 Arabidopsis halleri
Araha.23330s0012 2.0kb upstream 2.0kb upstream 1954 false Scaffold23330: 41375-43328 Arabidopsis halleri
Araha.23330s0012 2.0kb downstream 2.0kb downstream 5519 true Scaffold23330: 35856-41374 Arabidopsis halleri
Araha.23330s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold23330: 35856-37855 Arabidopsis halleri
Araha.23330s0012 5.0kb upstream 5.0kb upstream 5473 true Scaffold23330: 37856-43328 Arabidopsis halleri
Araha.23330s0012 5.0kb upstream 5.0kb upstream 1954 false Scaffold23330: 41375-43328 Arabidopsis halleri
Araha.23330s0012 5.0kb downstream 5.0kb downstream 8519 true Scaffold23330: 32856-41374 Arabidopsis halleri
Araha.23330s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold23330: 32856-37855 Arabidopsis halleri
Araha.23330s0012 10.0kb upstream 10.0kb upstream 5473 true Scaffold23330: 37856-43328 Arabidopsis halleri
Araha.23330s0012 10.0kb upstream 10.0kb upstream 1954 false Scaffold23330: 41375-43328 Arabidopsis halleri
Araha.23330s0012 10.0kb downstream 10.0kb downstream 13519 true Scaffold23330: 27856-41374 Arabidopsis halleri
Araha.23330s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold23330: 27856-37855 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791741 5273 Angiosperm View MSA
122331731 5261 Brassicaceae View MSA
123837659 5264 Brassicales-Malvales View MSA
124341185 5266 SBM View MSA
124240191 5268 Malvidae View MSA
124062069 5270 Rosid View MSA
123738080 5271 Pentapetalae View MSA
122788516 5272 Eudicot View MSA
121063041 5274 Embryophyte View MSA
123102827 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain