Gene : Araha.23215s0001 A. halleri v1.1

Defline:  (1 of 7) PF07816 - Protein of unknown function (DUF1645) (DUF1645) Genomic Order:  1
Name:  ? Araha.23215s0001 Secondary Identifier:  ? PAC:28847230

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.23215s0001 0.5kb upstream 0.5kb upstream 1512 true Scaffold23215: 242-1753 Arabidopsis halleri
Araha.23215s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold23215: 1254-1753 Arabidopsis halleri
Araha.23215s0001 0.5kb downstream 0.5kb downstream 1253 true Scaffold23215: 1-1253 Arabidopsis halleri
Araha.23215s0001 0.5kb downstream 0.5kb downstream 241 false Scaffold23215: 1-241 Arabidopsis halleri
Araha.23215s0001 1.0kb upstream 1.0kb upstream 2012 true Scaffold23215: 242-2253 Arabidopsis halleri
Araha.23215s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold23215: 1254-2253 Arabidopsis halleri
Araha.23215s0001 1.0kb downstream 1.0kb downstream 1253 true Scaffold23215: 1-1253 Arabidopsis halleri
Araha.23215s0001 1.0kb downstream 1.0kb downstream 241 false Scaffold23215: 1-241 Arabidopsis halleri
Araha.23215s0001 2.0kb upstream 2.0kb upstream 3012 true Scaffold23215: 242-3253 Arabidopsis halleri
Araha.23215s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold23215: 1254-3253 Arabidopsis halleri
Araha.23215s0001 2.0kb downstream 2.0kb downstream 1253 true Scaffold23215: 1-1253 Arabidopsis halleri
Araha.23215s0001 2.0kb downstream 2.0kb downstream 241 false Scaffold23215: 1-241 Arabidopsis halleri
Araha.23215s0001 5.0kb upstream 5.0kb upstream 6012 true Scaffold23215: 242-6253 Arabidopsis halleri
Araha.23215s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold23215: 1254-6253 Arabidopsis halleri
Araha.23215s0001 5.0kb downstream 5.0kb downstream 1253 true Scaffold23215: 1-1253 Arabidopsis halleri
Araha.23215s0001 5.0kb downstream 5.0kb downstream 241 false Scaffold23215: 1-241 Arabidopsis halleri
Araha.23215s0001 10.0kb upstream 10.0kb upstream 11012 true Scaffold23215: 242-11253 Arabidopsis halleri
Araha.23215s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold23215: 1254-11253 Arabidopsis halleri
Araha.23215s0001 10.0kb downstream 10.0kb downstream 1253 true Scaffold23215: 1-1253 Arabidopsis halleri
Araha.23215s0001 10.0kb downstream 10.0kb downstream 241 false Scaffold23215: 1-241 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374960 5261 Brassicaceae View MSA
123833567 5264 Brassicales-Malvales View MSA
124346958 5266 SBM View MSA
124243956 5268 Malvidae View MSA
124070219 5270 Rosid View MSA
123743916 5271 Pentapetalae View MSA
122785611 5272 Eudicot View MSA
122048154 5273 Angiosperm View MSA
121310868 5274 Embryophyte View MSA
123348251 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain