Gene : Araha.7837s0001 A. halleri v1.1
Defline:  (1 of 3) PTHR31311:SF4 - GLYCOSYLTRANSFERASE 3-RELATED Genomic Order:  1
Name:  ? Araha.7837s0001 Secondary Identifier:  ? PAC:28851918
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-5936 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.7837s0001 0.5kb upstream 0.5kb upstream 1142 true Scaffold7837: 1-1142 Arabidopsis halleri
Araha.7837s0001 0.5kb upstream 0.5kb upstream 14 false Scaffold7837: 1-14 Arabidopsis halleri
Araha.7837s0001 0.5kb downstream 0.5kb downstream 1628 true Scaffold7837: 15-1642 Arabidopsis halleri
Araha.7837s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold7837: 1143-1642 Arabidopsis halleri
Araha.7837s0001 1.0kb upstream 1.0kb upstream 1142 true Scaffold7837: 1-1142 Arabidopsis halleri
Araha.7837s0001 1.0kb upstream 1.0kb upstream 14 false Scaffold7837: 1-14 Arabidopsis halleri
Araha.7837s0001 1.0kb downstream 1.0kb downstream 2128 true Scaffold7837: 15-2142 Arabidopsis halleri
Araha.7837s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold7837: 1143-2142 Arabidopsis halleri
Araha.7837s0001 2.0kb upstream 2.0kb upstream 1142 true Scaffold7837: 1-1142 Arabidopsis halleri
Araha.7837s0001 2.0kb upstream 2.0kb upstream 14 false Scaffold7837: 1-14 Arabidopsis halleri
Araha.7837s0001 2.0kb downstream 2.0kb downstream 3128 true Scaffold7837: 15-3142 Arabidopsis halleri
Araha.7837s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold7837: 1143-3142 Arabidopsis halleri
Araha.7837s0001 5.0kb upstream 5.0kb upstream 1142 true Scaffold7837: 1-1142 Arabidopsis halleri
Araha.7837s0001 5.0kb upstream 5.0kb upstream 14 false Scaffold7837: 1-14 Arabidopsis halleri
Araha.7837s0001 5.0kb downstream 5.0kb downstream 6128 true Scaffold7837: 15-6142 Arabidopsis halleri
Araha.7837s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold7837: 1143-6142 Arabidopsis halleri
Araha.7837s0001 10.0kb upstream 10.0kb upstream 1142 true Scaffold7837: 1-1142 Arabidopsis halleri
Araha.7837s0001 10.0kb upstream 10.0kb upstream 14 false Scaffold7837: 1-14 Arabidopsis halleri
Araha.7837s0001 10.0kb downstream 10.0kb downstream 11128 true Scaffold7837: 15-11142 Arabidopsis halleri
Araha.7837s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold7837: 1143-11142 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364851 5261 Brassicaceae View MSA
123798849 5264 Brassicales-Malvales View MSA
124296432 5266 SBM View MSA
124148587 5268 Malvidae View MSA
124066918 5270 Rosid View MSA
123741049 5271 Pentapetalae View MSA
122787674 5272 Eudicot View MSA
122047290 5273 Angiosperm View MSA
121349054 5274 Embryophyte View MSA
123428220 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain