Gene : Araha.7743s0006 A. halleri v1.1
Defline:  (1 of 1) PTHR21145:SF1 - CHORISMATE MUTASE 2 Genomic Order:  6
Name:  ? Araha.7743s0006 Secondary Identifier:  ? PAC:28855864
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-3461 Arabidopsis halleri pathologic  
Ahalleri PWY-3462 Arabidopsis halleri pathologic  
Ahalleri PWY-3481 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.7743s0006 0.5kb upstream 0.5kb upstream 2223 true Scaffold7743: 14128-16350 Arabidopsis halleri
Araha.7743s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold7743: 14128-14627 Arabidopsis halleri
Araha.7743s0006 0.5kb downstream 0.5kb downstream 2223 true Scaffold7743: 14628-16850 Arabidopsis halleri
Araha.7743s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold7743: 16351-16850 Arabidopsis halleri
Araha.7743s0006 1.0kb upstream 1.0kb upstream 2723 true Scaffold7743: 13628-16350 Arabidopsis halleri
Araha.7743s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold7743: 13628-14627 Arabidopsis halleri
Araha.7743s0006 1.0kb downstream 1.0kb downstream 2723 true Scaffold7743: 14628-17350 Arabidopsis halleri
Araha.7743s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold7743: 16351-17350 Arabidopsis halleri
Araha.7743s0006 2.0kb upstream 2.0kb upstream 3723 true Scaffold7743: 12628-16350 Arabidopsis halleri
Araha.7743s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold7743: 12628-14627 Arabidopsis halleri
Araha.7743s0006 2.0kb downstream 2.0kb downstream 3723 true Scaffold7743: 14628-18350 Arabidopsis halleri
Araha.7743s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold7743: 16351-18350 Arabidopsis halleri
Araha.7743s0006 5.0kb upstream 5.0kb upstream 6723 true Scaffold7743: 9628-16350 Arabidopsis halleri
Araha.7743s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold7743: 9628-14627 Arabidopsis halleri
Araha.7743s0006 5.0kb downstream 5.0kb downstream 6723 true Scaffold7743: 14628-21350 Arabidopsis halleri
Araha.7743s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold7743: 16351-21350 Arabidopsis halleri
Araha.7743s0006 10.0kb upstream 10.0kb upstream 11723 true Scaffold7743: 4628-16350 Arabidopsis halleri
Araha.7743s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold7743: 4628-14627 Arabidopsis halleri
Araha.7743s0006 10.0kb downstream 10.0kb downstream 11723 true Scaffold7743: 14628-26350 Arabidopsis halleri
Araha.7743s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold7743: 16351-26350 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365997 5261 Brassicaceae View MSA
123835007 5264 Brassicales-Malvales View MSA
124338638 5266 SBM View MSA
124239132 5268 Malvidae View MSA
124062994 5270 Rosid View MSA
123742772 5271 Pentapetalae View MSA
122797161 5272 Eudicot View MSA
122050627 5273 Angiosperm View MSA
121312036 5274 Embryophyte View MSA
123427559 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain