Gene : Araha.7677s0001 A. halleri v1.1

Defline:  (1 of 4) PTHR12411:SF344 - CYSTEINE PROTEASE COMPONENT OF PROTEASE-INHIBITOR COMPLEX-RELATED Genomic Order:  1
Name:  ? Araha.7677s0001 Secondary Identifier:  ? PAC:28857942

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.7677s0001 0.5kb upstream 0.5kb upstream 3215 true Scaffold7677: 1109-4323 Arabidopsis halleri
Araha.7677s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold7677: 3824-4323 Arabidopsis halleri
Araha.7677s0001 0.5kb downstream 0.5kb downstream 3215 true Scaffold7677: 609-3823 Arabidopsis halleri
Araha.7677s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold7677: 609-1108 Arabidopsis halleri
Araha.7677s0001 1.0kb upstream 1.0kb upstream 3485 true Scaffold7677: 1109-4593 Arabidopsis halleri
Araha.7677s0001 1.0kb upstream 1.0kb upstream 770 false Scaffold7677: 3824-4593 Arabidopsis halleri
Araha.7677s0001 1.0kb downstream 1.0kb downstream 3715 true Scaffold7677: 109-3823 Arabidopsis halleri
Araha.7677s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold7677: 109-1108 Arabidopsis halleri
Araha.7677s0001 2.0kb upstream 2.0kb upstream 3485 true Scaffold7677: 1109-4593 Arabidopsis halleri
Araha.7677s0001 2.0kb upstream 2.0kb upstream 770 false Scaffold7677: 3824-4593 Arabidopsis halleri
Araha.7677s0001 2.0kb downstream 2.0kb downstream 3823 true Scaffold7677: 1-3823 Arabidopsis halleri
Araha.7677s0001 2.0kb downstream 2.0kb downstream 1108 false Scaffold7677: 1-1108 Arabidopsis halleri
Araha.7677s0001 5.0kb upstream 5.0kb upstream 3485 true Scaffold7677: 1109-4593 Arabidopsis halleri
Araha.7677s0001 5.0kb upstream 5.0kb upstream 770 false Scaffold7677: 3824-4593 Arabidopsis halleri
Araha.7677s0001 5.0kb downstream 5.0kb downstream 3823 true Scaffold7677: 1-3823 Arabidopsis halleri
Araha.7677s0001 5.0kb downstream 5.0kb downstream 1108 false Scaffold7677: 1-1108 Arabidopsis halleri
Araha.7677s0001 10.0kb upstream 10.0kb upstream 3485 true Scaffold7677: 1109-4593 Arabidopsis halleri
Araha.7677s0001 10.0kb upstream 10.0kb upstream 770 false Scaffold7677: 3824-4593 Arabidopsis halleri
Araha.7677s0001 10.0kb downstream 10.0kb downstream 3823 true Scaffold7677: 1-3823 Arabidopsis halleri
Araha.7677s0001 10.0kb downstream 10.0kb downstream 1108 false Scaffold7677: 1-1108 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361515 5261 Brassicaceae View MSA
123831665 5264 Brassicales-Malvales View MSA
124340897 5266 SBM View MSA
124247983 5268 Malvidae View MSA
124071516 5270 Rosid View MSA
123751389 5271 Pentapetalae View MSA
122796567 5272 Eudicot View MSA
122043914 5273 Angiosperm View MSA
123428950 5275 Viridiplantae View MSA
121348634 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain