Gene : Araha.25275s0001 A. halleri v1.1
Defline:  (1 of 2) PTHR12181:SF12 - PROTEIN LPIN-1 Genomic Order:  1
Name:  ? Araha.25275s0001 Secondary Identifier:  ? PAC:28846677
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri TRIGLSYN-PWY Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.25275s0001 0.5kb upstream 0.5kb upstream 4677 true Scaffold25275: 3372-8048 Arabidopsis halleri
Araha.25275s0001 0.5kb upstream 0.5kb upstream 250 false Scaffold25275: 7799-8048 Arabidopsis halleri
Araha.25275s0001 0.5kb downstream 0.5kb downstream 4927 true Scaffold25275: 2872-7798 Arabidopsis halleri
Araha.25275s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold25275: 2872-3371 Arabidopsis halleri
Araha.25275s0001 1.0kb upstream 1.0kb upstream 4677 true Scaffold25275: 3372-8048 Arabidopsis halleri
Araha.25275s0001 1.0kb upstream 1.0kb upstream 250 false Scaffold25275: 7799-8048 Arabidopsis halleri
Araha.25275s0001 1.0kb downstream 1.0kb downstream 5427 true Scaffold25275: 2372-7798 Arabidopsis halleri
Araha.25275s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold25275: 2372-3371 Arabidopsis halleri
Araha.25275s0001 2.0kb upstream 2.0kb upstream 4677 true Scaffold25275: 3372-8048 Arabidopsis halleri
Araha.25275s0001 2.0kb upstream 2.0kb upstream 250 false Scaffold25275: 7799-8048 Arabidopsis halleri
Araha.25275s0001 2.0kb downstream 2.0kb downstream 6427 true Scaffold25275: 1372-7798 Arabidopsis halleri
Araha.25275s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold25275: 1372-3371 Arabidopsis halleri
Araha.25275s0001 5.0kb upstream 5.0kb upstream 4677 true Scaffold25275: 3372-8048 Arabidopsis halleri
Araha.25275s0001 5.0kb upstream 5.0kb upstream 250 false Scaffold25275: 7799-8048 Arabidopsis halleri
Araha.25275s0001 5.0kb downstream 5.0kb downstream 7798 true Scaffold25275: 1-7798 Arabidopsis halleri
Araha.25275s0001 5.0kb downstream 5.0kb downstream 3371 false Scaffold25275: 1-3371 Arabidopsis halleri
Araha.25275s0001 10.0kb upstream 10.0kb upstream 4677 true Scaffold25275: 3372-8048 Arabidopsis halleri
Araha.25275s0001 10.0kb upstream 10.0kb upstream 250 false Scaffold25275: 7799-8048 Arabidopsis halleri
Araha.25275s0001 10.0kb downstream 10.0kb downstream 7798 true Scaffold25275: 1-7798 Arabidopsis halleri
Araha.25275s0001 10.0kb downstream 10.0kb downstream 3371 false Scaffold25275: 1-3371 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375198 5261 Brassicaceae View MSA
123837435 5264 Brassicales-Malvales View MSA
124338514 5266 SBM View MSA
124253229 5268 Malvidae View MSA
124065604 5270 Rosid View MSA
123741487 5271 Pentapetalae View MSA
122792824 5272 Eudicot View MSA
122048354 5273 Angiosperm View MSA
121350822 5274 Embryophyte View MSA
123381897 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain