Gene : Araha.25338s0003 A. halleri v1.1
Defline:  (1 of 1) PTHR31235:SF70 - PEROXIDASE 60 Genomic Order:  3
Name:  ? Araha.25338s0003 Secondary Identifier:  ? PAC:28843185
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-5466 Arabidopsis halleri pathologic  
Ahalleri PWY-7214 Arabidopsis halleri pathologic  
Ahalleri PWY-7445 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.25338s0003 0.5kb upstream 0.5kb upstream 2047 true Scaffold25338: 3148-5194 Arabidopsis halleri
Araha.25338s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold25338: 4695-5194 Arabidopsis halleri
Araha.25338s0003 0.5kb downstream 0.5kb downstream 2047 true Scaffold25338: 2648-4694 Arabidopsis halleri
Araha.25338s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold25338: 2648-3147 Arabidopsis halleri
Araha.25338s0003 1.0kb upstream 1.0kb upstream 2547 true Scaffold25338: 3148-5694 Arabidopsis halleri
Araha.25338s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold25338: 4695-5694 Arabidopsis halleri
Araha.25338s0003 1.0kb downstream 1.0kb downstream 2547 true Scaffold25338: 2148-4694 Arabidopsis halleri
Araha.25338s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold25338: 2148-3147 Arabidopsis halleri
Araha.25338s0003 2.0kb upstream 2.0kb upstream 3547 true Scaffold25338: 3148-6694 Arabidopsis halleri
Araha.25338s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold25338: 4695-6694 Arabidopsis halleri
Araha.25338s0003 2.0kb downstream 2.0kb downstream 3547 true Scaffold25338: 1148-4694 Arabidopsis halleri
Araha.25338s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold25338: 1148-3147 Arabidopsis halleri
Araha.25338s0003 5.0kb upstream 5.0kb upstream 6547 true Scaffold25338: 3148-9694 Arabidopsis halleri
Araha.25338s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold25338: 4695-9694 Arabidopsis halleri
Araha.25338s0003 5.0kb downstream 5.0kb downstream 4694 true Scaffold25338: 1-4694 Arabidopsis halleri
Araha.25338s0003 5.0kb downstream 5.0kb downstream 3147 false Scaffold25338: 1-3147 Arabidopsis halleri
Araha.25338s0003 10.0kb upstream 10.0kb upstream 11480 true Scaffold25338: 3148-14627 Arabidopsis halleri
Araha.25338s0003 10.0kb upstream 10.0kb upstream 9933 false Scaffold25338: 4695-14627 Arabidopsis halleri
Araha.25338s0003 10.0kb downstream 10.0kb downstream 4694 true Scaffold25338: 1-4694 Arabidopsis halleri
Araha.25338s0003 10.0kb downstream 10.0kb downstream 3147 false Scaffold25338: 1-3147 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363507 5261 Brassicaceae View MSA
123834251 5264 Brassicales-Malvales View MSA
124341935 5266 SBM View MSA
124244557 5268 Malvidae View MSA
124063929 5270 Rosid View MSA
123745687 5271 Pentapetalae View MSA
122794580 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain