Gene : Araha.25327s0003 A. halleri v1.1
Defline:  (1 of 2) 2.1.1.190 - 23S rRNA (uracil(1939)-C(5))-methyltransferase / RNA uridine methyltransferase A Genomic Order:  3
Name:  ? Araha.25327s0003 Secondary Identifier:  ? PAC:28839687
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.25327s0003 0.5kb upstream 0.5kb upstream 3357 true Scaffold25327: 6553-9909 Arabidopsis halleri
Araha.25327s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold25327: 6553-7052 Arabidopsis halleri
Araha.25327s0003 0.5kb downstream 0.5kb downstream 3357 true Scaffold25327: 7053-10409 Arabidopsis halleri
Araha.25327s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold25327: 9910-10409 Arabidopsis halleri
Araha.25327s0003 1.0kb upstream 1.0kb upstream 3857 true Scaffold25327: 6053-9909 Arabidopsis halleri
Araha.25327s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold25327: 6053-7052 Arabidopsis halleri
Araha.25327s0003 1.0kb downstream 1.0kb downstream 3857 true Scaffold25327: 7053-10909 Arabidopsis halleri
Araha.25327s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold25327: 9910-10909 Arabidopsis halleri
Araha.25327s0003 2.0kb upstream 2.0kb upstream 4857 true Scaffold25327: 5053-9909 Arabidopsis halleri
Araha.25327s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold25327: 5053-7052 Arabidopsis halleri
Araha.25327s0003 2.0kb downstream 2.0kb downstream 4857 true Scaffold25327: 7053-11909 Arabidopsis halleri
Araha.25327s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold25327: 9910-11909 Arabidopsis halleri
Araha.25327s0003 5.0kb upstream 5.0kb upstream 7857 true Scaffold25327: 2053-9909 Arabidopsis halleri
Araha.25327s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold25327: 2053-7052 Arabidopsis halleri
Araha.25327s0003 5.0kb downstream 5.0kb downstream 7857 true Scaffold25327: 7053-14909 Arabidopsis halleri
Araha.25327s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold25327: 9910-14909 Arabidopsis halleri
Araha.25327s0003 10.0kb upstream 10.0kb upstream 9909 true Scaffold25327: 1-9909 Arabidopsis halleri
Araha.25327s0003 10.0kb upstream 10.0kb upstream 7052 false Scaffold25327: 1-7052 Arabidopsis halleri
Araha.25327s0003 10.0kb downstream 10.0kb downstream 12857 true Scaffold25327: 7053-19909 Arabidopsis halleri
Araha.25327s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold25327: 9910-19909 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360374 5261 Brassicaceae View MSA
123828162 5264 Brassicales-Malvales View MSA
124340624 5266 SBM View MSA
124241822 5268 Malvidae View MSA
124060880 5270 Rosid View MSA
123737477 5271 Pentapetalae View MSA
122788250 5272 Eudicot View MSA
122042152 5273 Angiosperm View MSA
121345091 5274 Embryophyte View MSA
123424748 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain