Gene : Araha.24854s0001 A. halleri v1.1

Defline:  (1 of 5) PTHR14095 - PHOSPHATASE 2A REGULATORY SUBUNIT-RELATED Genomic Order:  1
Name:  ? Araha.24854s0001 Secondary Identifier:  ? PAC:28841186

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.24854s0001 0.5kb upstream 0.5kb upstream 4541 true Scaffold24854: 3892-8432 Arabidopsis halleri
Araha.24854s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold24854: 3892-4391 Arabidopsis halleri
Araha.24854s0001 0.5kb downstream 0.5kb downstream 4541 true Scaffold24854: 4392-8932 Arabidopsis halleri
Araha.24854s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold24854: 8433-8932 Arabidopsis halleri
Araha.24854s0001 1.0kb upstream 1.0kb upstream 5041 true Scaffold24854: 3392-8432 Arabidopsis halleri
Araha.24854s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold24854: 3392-4391 Arabidopsis halleri
Araha.24854s0001 1.0kb downstream 1.0kb downstream 5041 true Scaffold24854: 4392-9432 Arabidopsis halleri
Araha.24854s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold24854: 8433-9432 Arabidopsis halleri
Araha.24854s0001 2.0kb upstream 2.0kb upstream 6041 true Scaffold24854: 2392-8432 Arabidopsis halleri
Araha.24854s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold24854: 2392-4391 Arabidopsis halleri
Araha.24854s0001 2.0kb downstream 2.0kb downstream 6041 true Scaffold24854: 4392-10432 Arabidopsis halleri
Araha.24854s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold24854: 8433-10432 Arabidopsis halleri
Araha.24854s0001 5.0kb upstream 5.0kb upstream 8432 true Scaffold24854: 1-8432 Arabidopsis halleri
Araha.24854s0001 5.0kb upstream 5.0kb upstream 4391 false Scaffold24854: 1-4391 Arabidopsis halleri
Araha.24854s0001 5.0kb downstream 5.0kb downstream 9041 true Scaffold24854: 4392-13432 Arabidopsis halleri
Araha.24854s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold24854: 8433-13432 Arabidopsis halleri
Araha.24854s0001 10.0kb upstream 10.0kb upstream 8432 true Scaffold24854: 1-8432 Arabidopsis halleri
Araha.24854s0001 10.0kb upstream 10.0kb upstream 4391 false Scaffold24854: 1-4391 Arabidopsis halleri
Araha.24854s0001 10.0kb downstream 10.0kb downstream 12097 true Scaffold24854: 4392-16488 Arabidopsis halleri
Araha.24854s0001 10.0kb downstream 10.0kb downstream 8056 false Scaffold24854: 8433-16488 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121483949 5273 Angiosperm Singleton cluster - no MSA
122317664 5261 Brassicaceae Singleton cluster - no MSA
123759264 5264 Brassicales-Malvales Singleton cluster - no MSA
124257899 5266 SBM Singleton cluster - no MSA
124114522 5268 Malvidae Singleton cluster - no MSA
123843914 5270 Rosid Singleton cluster - no MSA
123430197 5271 Pentapetalae Singleton cluster - no MSA
122465818 5272 Eudicot Singleton cluster - no MSA
120757344 5274 Embryophyte Singleton cluster - no MSA
122799804 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain