Gene : Araha.7894s0002 A. halleri v1.1
Defline:  (1 of 4) 2.3.3.1 - Citrate (Si)-synthase / Citrate oxaloacetate-lyase ((pro-3S)-CH(2)COO->acetyl-CoA) Genomic Order:  2
Name:  ? Araha.7894s0002 Secondary Identifier:  ? PAC:28858581
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri GLYOXYLATE-BYPASS Arabidopsis halleri pathologic  
Ahalleri PWY-5464 Arabidopsis halleri pathologic  
Ahalleri PWY-561 Arabidopsis halleri pathologic  
Ahalleri PWY-5690 Arabidopsis halleri pathologic  
Ahalleri PWY-6549 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.7894s0002 0.5kb upstream 0.5kb upstream 4987 true Scaffold7894: 5324-10310 Arabidopsis halleri
Araha.7894s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold7894: 9811-10310 Arabidopsis halleri
Araha.7894s0002 0.5kb downstream 0.5kb downstream 4987 true Scaffold7894: 4824-9810 Arabidopsis halleri
Araha.7894s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold7894: 4824-5323 Arabidopsis halleri
Araha.7894s0002 1.0kb upstream 1.0kb upstream 5487 true Scaffold7894: 5324-10810 Arabidopsis halleri
Araha.7894s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold7894: 9811-10810 Arabidopsis halleri
Araha.7894s0002 1.0kb downstream 1.0kb downstream 5487 true Scaffold7894: 4324-9810 Arabidopsis halleri
Araha.7894s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold7894: 4324-5323 Arabidopsis halleri
Araha.7894s0002 2.0kb upstream 2.0kb upstream 6487 true Scaffold7894: 5324-11810 Arabidopsis halleri
Araha.7894s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold7894: 9811-11810 Arabidopsis halleri
Araha.7894s0002 2.0kb downstream 2.0kb downstream 6487 true Scaffold7894: 3324-9810 Arabidopsis halleri
Araha.7894s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold7894: 3324-5323 Arabidopsis halleri
Araha.7894s0002 5.0kb upstream 5.0kb upstream 9487 true Scaffold7894: 5324-14810 Arabidopsis halleri
Araha.7894s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold7894: 9811-14810 Arabidopsis halleri
Araha.7894s0002 5.0kb downstream 5.0kb downstream 9487 true Scaffold7894: 324-9810 Arabidopsis halleri
Araha.7894s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold7894: 324-5323 Arabidopsis halleri
Araha.7894s0002 10.0kb upstream 10.0kb upstream 14487 true Scaffold7894: 5324-19810 Arabidopsis halleri
Araha.7894s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold7894: 9811-19810 Arabidopsis halleri
Araha.7894s0002 10.0kb downstream 10.0kb downstream 9810 true Scaffold7894: 1-9810 Arabidopsis halleri
Araha.7894s0002 10.0kb downstream 10.0kb downstream 5323 false Scaffold7894: 1-5323 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041314 5273 Angiosperm View MSA
122364825 5261 Brassicaceae View MSA
123832003 5264 Brassicales-Malvales View MSA
124343675 5266 SBM View MSA
124250397 5268 Malvidae View MSA
124068700 5270 Rosid View MSA
123737684 5271 Pentapetalae View MSA
122792616 5272 Eudicot View MSA
121345226 5274 Embryophyte View MSA
123424186 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain