Gene : Araha.8365s0001 A. halleri v1.1

Defline:  (1 of 4) PTHR13832:SF286 - PROTEIN PHOSPHATASE 2C 33-RELATED Genomic Order:  1
Name:  ? Araha.8365s0001 Secondary Identifier:  ? PAC:28856236

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.8365s0001 0.5kb upstream 0.5kb upstream 3066 true Scaffold8365: 1-3066 Arabidopsis halleri
Araha.8365s0001 0.5kb upstream 0.5kb upstream 479 false Scaffold8365: 1-479 Arabidopsis halleri
Araha.8365s0001 0.5kb downstream 0.5kb downstream 3087 true Scaffold8365: 480-3566 Arabidopsis halleri
Araha.8365s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold8365: 3067-3566 Arabidopsis halleri
Araha.8365s0001 1.0kb upstream 1.0kb upstream 3066 true Scaffold8365: 1-3066 Arabidopsis halleri
Araha.8365s0001 1.0kb upstream 1.0kb upstream 479 false Scaffold8365: 1-479 Arabidopsis halleri
Araha.8365s0001 1.0kb downstream 1.0kb downstream 3587 true Scaffold8365: 480-4066 Arabidopsis halleri
Araha.8365s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold8365: 3067-4066 Arabidopsis halleri
Araha.8365s0001 2.0kb upstream 2.0kb upstream 3066 true Scaffold8365: 1-3066 Arabidopsis halleri
Araha.8365s0001 2.0kb upstream 2.0kb upstream 479 false Scaffold8365: 1-479 Arabidopsis halleri
Araha.8365s0001 2.0kb downstream 2.0kb downstream 4587 true Scaffold8365: 480-5066 Arabidopsis halleri
Araha.8365s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold8365: 3067-5066 Arabidopsis halleri
Araha.8365s0001 5.0kb upstream 5.0kb upstream 3066 true Scaffold8365: 1-3066 Arabidopsis halleri
Araha.8365s0001 5.0kb upstream 5.0kb upstream 479 false Scaffold8365: 1-479 Arabidopsis halleri
Araha.8365s0001 5.0kb downstream 5.0kb downstream 7587 true Scaffold8365: 480-8066 Arabidopsis halleri
Araha.8365s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold8365: 3067-8066 Arabidopsis halleri
Araha.8365s0001 10.0kb upstream 10.0kb upstream 3066 true Scaffold8365: 1-3066 Arabidopsis halleri
Araha.8365s0001 10.0kb upstream 10.0kb upstream 479 false Scaffold8365: 1-479 Arabidopsis halleri
Araha.8365s0001 10.0kb downstream 10.0kb downstream 9837 true Scaffold8365: 480-10316 Arabidopsis halleri
Araha.8365s0001 10.0kb downstream 10.0kb downstream 7250 false Scaffold8365: 3067-10316 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370637 5261 Brassicaceae View MSA
123800008 5264 Brassicales-Malvales View MSA
124297470 5266 SBM View MSA
124149353 5268 Malvidae View MSA
123875174 5270 Rosid View MSA
123459041 5271 Pentapetalae View MSA
122494437 5272 Eudicot View MSA
122043983 5273 Angiosperm View MSA
121350683 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain