Gene : Araha.8375s0001 A. halleri v1.1
Defline:  (1 of 1) KOG3119//KOG4395 - Basic region leucine zipper transcription factor // Transcription factor Atonal, contains HTH domain Genomic Order:  1
Name:  ? Araha.8375s0001 Secondary Identifier:  ? PAC:28862239
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.8375s0001 0.5kb upstream 0.5kb upstream 5034 true Scaffold8375: 7597-12630 Arabidopsis halleri
Araha.8375s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold8375: 7597-8096 Arabidopsis halleri
Araha.8375s0001 0.5kb downstream 0.5kb downstream 5034 true Scaffold8375: 8097-13130 Arabidopsis halleri
Araha.8375s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold8375: 12631-13130 Arabidopsis halleri
Araha.8375s0001 1.0kb upstream 1.0kb upstream 5534 true Scaffold8375: 7097-12630 Arabidopsis halleri
Araha.8375s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold8375: 7097-8096 Arabidopsis halleri
Araha.8375s0001 1.0kb downstream 1.0kb downstream 5534 true Scaffold8375: 8097-13630 Arabidopsis halleri
Araha.8375s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold8375: 12631-13630 Arabidopsis halleri
Araha.8375s0001 2.0kb upstream 2.0kb upstream 6534 true Scaffold8375: 6097-12630 Arabidopsis halleri
Araha.8375s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold8375: 6097-8096 Arabidopsis halleri
Araha.8375s0001 2.0kb downstream 2.0kb downstream 6534 true Scaffold8375: 8097-14630 Arabidopsis halleri
Araha.8375s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold8375: 12631-14630 Arabidopsis halleri
Araha.8375s0001 5.0kb upstream 5.0kb upstream 9534 true Scaffold8375: 3097-12630 Arabidopsis halleri
Araha.8375s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold8375: 3097-8096 Arabidopsis halleri
Araha.8375s0001 5.0kb downstream 5.0kb downstream 9534 true Scaffold8375: 8097-17630 Arabidopsis halleri
Araha.8375s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold8375: 12631-17630 Arabidopsis halleri
Araha.8375s0001 10.0kb upstream 10.0kb upstream 12630 true Scaffold8375: 1-12630 Arabidopsis halleri
Araha.8375s0001 10.0kb upstream 10.0kb upstream 8096 false Scaffold8375: 1-8096 Arabidopsis halleri
Araha.8375s0001 10.0kb downstream 10.0kb downstream 14534 true Scaffold8375: 8097-22630 Arabidopsis halleri
Araha.8375s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold8375: 12631-22630 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365555 5261 Brassicaceae View MSA
123840444 5264 Brassicales-Malvales View MSA
124337909 5266 SBM View MSA
124253452 5268 Malvidae View MSA
124072195 5270 Rosid View MSA
123752263 5271 Pentapetalae View MSA
122797148 5272 Eudicot View MSA
122048135 5273 Angiosperm View MSA
121351644 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain