Gene : Araha.26365s0007 A. halleri v1.1

Defline:  (1 of 1) PTHR11952:SF8 - UDP-GLUCOSE PYROPHOSPHORYLASE 3 Genomic Order:  7
Name:  ? Araha.26365s0007 Secondary Identifier:  ? PAC:28856957

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-3801 Arabidopsis halleri pathologic  
Ahalleri PWY-6527 Arabidopsis halleri pathologic  
Ahalleri PWY-7238 Arabidopsis halleri pathologic  
Ahalleri PWY-7343 Arabidopsis halleri pathologic  
Ahalleri SUCSYN-PWY Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.26365s0007 0.5kb upstream 0.5kb upstream 5849 true Scaffold26365: 35054-40902 Arabidopsis halleri
Araha.26365s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold26365: 40403-40902 Arabidopsis halleri
Araha.26365s0007 0.5kb downstream 0.5kb downstream 5849 true Scaffold26365: 34554-40402 Arabidopsis halleri
Araha.26365s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold26365: 34554-35053 Arabidopsis halleri
Araha.26365s0007 1.0kb upstream 1.0kb upstream 6349 true Scaffold26365: 35054-41402 Arabidopsis halleri
Araha.26365s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold26365: 40403-41402 Arabidopsis halleri
Araha.26365s0007 1.0kb downstream 1.0kb downstream 6349 true Scaffold26365: 34054-40402 Arabidopsis halleri
Araha.26365s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold26365: 34054-35053 Arabidopsis halleri
Araha.26365s0007 2.0kb upstream 2.0kb upstream 7349 true Scaffold26365: 35054-42402 Arabidopsis halleri
Araha.26365s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold26365: 40403-42402 Arabidopsis halleri
Araha.26365s0007 2.0kb downstream 2.0kb downstream 7349 true Scaffold26365: 33054-40402 Arabidopsis halleri
Araha.26365s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold26365: 33054-35053 Arabidopsis halleri
Araha.26365s0007 5.0kb upstream 5.0kb upstream 10349 true Scaffold26365: 35054-45402 Arabidopsis halleri
Araha.26365s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold26365: 40403-45402 Arabidopsis halleri
Araha.26365s0007 5.0kb downstream 5.0kb downstream 10349 true Scaffold26365: 30054-40402 Arabidopsis halleri
Araha.26365s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold26365: 30054-35053 Arabidopsis halleri
Araha.26365s0007 10.0kb upstream 10.0kb upstream 15349 true Scaffold26365: 35054-50402 Arabidopsis halleri
Araha.26365s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold26365: 40403-50402 Arabidopsis halleri
Araha.26365s0007 10.0kb downstream 10.0kb downstream 15349 true Scaffold26365: 25054-40402 Arabidopsis halleri
Araha.26365s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold26365: 25054-35053 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365164 5261 Brassicaceae View MSA
123830376 5264 Brassicales-Malvales View MSA
124341455 5266 SBM View MSA
124239983 5268 Malvidae View MSA
124063729 5270 Rosid View MSA
123739193 5271 Pentapetalae View MSA
122788288 5272 Eudicot View MSA
122041983 5273 Angiosperm View MSA
121345707 5274 Embryophyte View MSA
123424672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain