Gene : Araha.25971s0003 A. halleri v1.1
Defline:  (1 of 1) PTHR13495 - NEFA-INTERACTING NUCLEAR PROTEIN NIP30 Genomic Order:  3
Name:  ? Araha.25971s0003 Secondary Identifier:  ? PAC:28859273
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.25971s0003 0.5kb upstream 0.5kb upstream 2520 true Scaffold25971: 5635-8154 Arabidopsis halleri
Araha.25971s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold25971: 7655-8154 Arabidopsis halleri
Araha.25971s0003 0.5kb downstream 0.5kb downstream 2520 true Scaffold25971: 5135-7654 Arabidopsis halleri
Araha.25971s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold25971: 5135-5634 Arabidopsis halleri
Araha.25971s0003 1.0kb upstream 1.0kb upstream 3020 true Scaffold25971: 5635-8654 Arabidopsis halleri
Araha.25971s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold25971: 7655-8654 Arabidopsis halleri
Araha.25971s0003 1.0kb downstream 1.0kb downstream 3020 true Scaffold25971: 4635-7654 Arabidopsis halleri
Araha.25971s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold25971: 4635-5634 Arabidopsis halleri
Araha.25971s0003 2.0kb upstream 2.0kb upstream 4020 true Scaffold25971: 5635-9654 Arabidopsis halleri
Araha.25971s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold25971: 7655-9654 Arabidopsis halleri
Araha.25971s0003 2.0kb downstream 2.0kb downstream 4020 true Scaffold25971: 3635-7654 Arabidopsis halleri
Araha.25971s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold25971: 3635-5634 Arabidopsis halleri
Araha.25971s0003 5.0kb upstream 5.0kb upstream 7020 true Scaffold25971: 5635-12654 Arabidopsis halleri
Araha.25971s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold25971: 7655-12654 Arabidopsis halleri
Araha.25971s0003 5.0kb downstream 5.0kb downstream 7020 true Scaffold25971: 635-7654 Arabidopsis halleri
Araha.25971s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold25971: 635-5634 Arabidopsis halleri
Araha.25971s0003 10.0kb upstream 10.0kb upstream 10569 true Scaffold25971: 5635-16203 Arabidopsis halleri
Araha.25971s0003 10.0kb upstream 10.0kb upstream 8549 false Scaffold25971: 7655-16203 Arabidopsis halleri
Araha.25971s0003 10.0kb downstream 10.0kb downstream 7654 true Scaffold25971: 1-7654 Arabidopsis halleri
Araha.25971s0003 10.0kb downstream 10.0kb downstream 5634 false Scaffold25971: 1-5634 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366192 5261 Brassicaceae View MSA
123830029 5264 Brassicales-Malvales View MSA
124343062 5266 SBM View MSA
124241413 5268 Malvidae View MSA
124063271 5270 Rosid View MSA
123737480 5271 Pentapetalae View MSA
122787094 5272 Eudicot View MSA
122047119 5273 Angiosperm View MSA
121346332 5274 Embryophyte View MSA
123425229 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain