Gene : Araha.25896s0005 A. halleri v1.1

Defline:  (1 of 2) PTHR11851:SF123 - NARDILYSIN Genomic Order:  5
Name:  ? Araha.25896s0005 Secondary Identifier:  ? PAC:28846889

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.25896s0005 0.5kb upstream 0.5kb upstream 7084 true Scaffold25896: 8014-15097 Arabidopsis halleri
Araha.25896s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold25896: 8014-8513 Arabidopsis halleri
Araha.25896s0005 0.5kb downstream 0.5kb downstream 7084 true Scaffold25896: 8514-15597 Arabidopsis halleri
Araha.25896s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold25896: 15098-15597 Arabidopsis halleri
Araha.25896s0005 1.0kb upstream 1.0kb upstream 7584 true Scaffold25896: 7514-15097 Arabidopsis halleri
Araha.25896s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold25896: 7514-8513 Arabidopsis halleri
Araha.25896s0005 1.0kb downstream 1.0kb downstream 7584 true Scaffold25896: 8514-16097 Arabidopsis halleri
Araha.25896s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold25896: 15098-16097 Arabidopsis halleri
Araha.25896s0005 2.0kb upstream 2.0kb upstream 8584 true Scaffold25896: 6514-15097 Arabidopsis halleri
Araha.25896s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold25896: 6514-8513 Arabidopsis halleri
Araha.25896s0005 2.0kb downstream 2.0kb downstream 8584 true Scaffold25896: 8514-17097 Arabidopsis halleri
Araha.25896s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold25896: 15098-17097 Arabidopsis halleri
Araha.25896s0005 5.0kb upstream 5.0kb upstream 11584 true Scaffold25896: 3514-15097 Arabidopsis halleri
Araha.25896s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold25896: 3514-8513 Arabidopsis halleri
Araha.25896s0005 5.0kb downstream 5.0kb downstream 11584 true Scaffold25896: 8514-20097 Arabidopsis halleri
Araha.25896s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold25896: 15098-20097 Arabidopsis halleri
Araha.25896s0005 10.0kb upstream 10.0kb upstream 15097 true Scaffold25896: 1-15097 Arabidopsis halleri
Araha.25896s0005 10.0kb upstream 10.0kb upstream 8513 false Scaffold25896: 1-8513 Arabidopsis halleri
Araha.25896s0005 10.0kb downstream 10.0kb downstream 12703 true Scaffold25896: 8514-21216 Arabidopsis halleri
Araha.25896s0005 10.0kb downstream 10.0kb downstream 6119 false Scaffold25896: 15098-21216 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377727 5261 Brassicaceae View MSA
123828493 5264 Brassicales-Malvales View MSA
124341905 5266 SBM View MSA
124242675 5268 Malvidae View MSA
124061492 5270 Rosid View MSA
123738387 5271 Pentapetalae View MSA
122790757 5272 Eudicot View MSA
122043199 5273 Angiosperm View MSA
121346552 5274 Embryophyte View MSA
123428383 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain