Gene : Araha.25866s0003 A. halleri v1.1

Defline:  (1 of 5) PTHR13904 - PRE-MRNA SPLICING FACTOR PRP31 Genomic Order:  3
Name:  ? Araha.25866s0003 Secondary Identifier:  ? PAC:28855681

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.25866s0003 0.5kb upstream 0.5kb upstream 2945 true Scaffold25866: 12518-15462 Arabidopsis halleri
Araha.25866s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold25866: 14963-15462 Arabidopsis halleri
Araha.25866s0003 0.5kb downstream 0.5kb downstream 2945 true Scaffold25866: 12018-14962 Arabidopsis halleri
Araha.25866s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold25866: 12018-12517 Arabidopsis halleri
Araha.25866s0003 1.0kb upstream 1.0kb upstream 3445 true Scaffold25866: 12518-15962 Arabidopsis halleri
Araha.25866s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold25866: 14963-15962 Arabidopsis halleri
Araha.25866s0003 1.0kb downstream 1.0kb downstream 3445 true Scaffold25866: 11518-14962 Arabidopsis halleri
Araha.25866s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold25866: 11518-12517 Arabidopsis halleri
Araha.25866s0003 2.0kb upstream 2.0kb upstream 4445 true Scaffold25866: 12518-16962 Arabidopsis halleri
Araha.25866s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold25866: 14963-16962 Arabidopsis halleri
Araha.25866s0003 2.0kb downstream 2.0kb downstream 4445 true Scaffold25866: 10518-14962 Arabidopsis halleri
Araha.25866s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold25866: 10518-12517 Arabidopsis halleri
Araha.25866s0003 5.0kb upstream 5.0kb upstream 7234 true Scaffold25866: 12518-19751 Arabidopsis halleri
Araha.25866s0003 5.0kb upstream 5.0kb upstream 4789 false Scaffold25866: 14963-19751 Arabidopsis halleri
Araha.25866s0003 5.0kb downstream 5.0kb downstream 7445 true Scaffold25866: 7518-14962 Arabidopsis halleri
Araha.25866s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold25866: 7518-12517 Arabidopsis halleri
Araha.25866s0003 10.0kb upstream 10.0kb upstream 7234 true Scaffold25866: 12518-19751 Arabidopsis halleri
Araha.25866s0003 10.0kb upstream 10.0kb upstream 4789 false Scaffold25866: 14963-19751 Arabidopsis halleri
Araha.25866s0003 10.0kb downstream 10.0kb downstream 12445 true Scaffold25866: 2518-14962 Arabidopsis halleri
Araha.25866s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold25866: 2518-12517 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372123 5261 Brassicaceae View MSA
123828059 5264 Brassicales-Malvales View MSA
124344698 5266 SBM View MSA
124244824 5268 Malvidae View MSA
124062587 5270 Rosid View MSA
123753460 5271 Pentapetalae View MSA
122792370 5272 Eudicot View MSA
122045972 5273 Angiosperm View MSA
123428992 5275 Viridiplantae View MSA
121345979 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain