Gene : Araha.8269s0003 A. halleri v1.1

Defline:  (1 of 2) PTHR11599:SF16 - PROTEASOME SUBUNIT ALPHA TYPE-2 Genomic Order:  3
Name:  ? Araha.8269s0003 Secondary Identifier:  ? PAC:28853357

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.8269s0003 0.5kb upstream 0.5kb upstream 3141 true Scaffold8269: 26047-29187 Arabidopsis halleri
Araha.8269s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold8269: 28688-29187 Arabidopsis halleri
Araha.8269s0003 0.5kb downstream 0.5kb downstream 3141 true Scaffold8269: 25547-28687 Arabidopsis halleri
Araha.8269s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold8269: 25547-26046 Arabidopsis halleri
Araha.8269s0003 1.0kb upstream 1.0kb upstream 3641 true Scaffold8269: 26047-29687 Arabidopsis halleri
Araha.8269s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold8269: 28688-29687 Arabidopsis halleri
Araha.8269s0003 1.0kb downstream 1.0kb downstream 3641 true Scaffold8269: 25047-28687 Arabidopsis halleri
Araha.8269s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold8269: 25047-26046 Arabidopsis halleri
Araha.8269s0003 2.0kb upstream 2.0kb upstream 4641 true Scaffold8269: 26047-30687 Arabidopsis halleri
Araha.8269s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold8269: 28688-30687 Arabidopsis halleri
Araha.8269s0003 2.0kb downstream 2.0kb downstream 4641 true Scaffold8269: 24047-28687 Arabidopsis halleri
Araha.8269s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold8269: 24047-26046 Arabidopsis halleri
Araha.8269s0003 5.0kb upstream 5.0kb upstream 7641 true Scaffold8269: 26047-33687 Arabidopsis halleri
Araha.8269s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold8269: 28688-33687 Arabidopsis halleri
Araha.8269s0003 5.0kb downstream 5.0kb downstream 7641 true Scaffold8269: 21047-28687 Arabidopsis halleri
Araha.8269s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold8269: 21047-26046 Arabidopsis halleri
Araha.8269s0003 10.0kb upstream 10.0kb upstream 12641 true Scaffold8269: 26047-38687 Arabidopsis halleri
Araha.8269s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold8269: 28688-38687 Arabidopsis halleri
Araha.8269s0003 10.0kb downstream 10.0kb downstream 12641 true Scaffold8269: 16047-28687 Arabidopsis halleri
Araha.8269s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold8269: 16047-26046 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026291 5273 Angiosperm View MSA
122376860 5261 Brassicaceae View MSA
123841015 5264 Brassicales-Malvales View MSA
124350463 5266 SBM View MSA
124241127 5268 Malvidae View MSA
124069190 5270 Rosid View MSA
123746972 5271 Pentapetalae View MSA
122795211 5272 Eudicot View MSA
121350421 5274 Embryophyte View MSA
123426464 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain