Gene : Araha.27285s0002 A. halleri v1.1

Defline:  (1 of 3) PTHR10688:SF1 - F22F7.12 PROTEIN-RELATED Genomic Order:  2
Name:  ? Araha.27285s0002 Secondary Identifier:  ? PAC:28838829

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.27285s0002 0.5kb upstream 0.5kb upstream 2504 true Scaffold27285: 2101-4604 Arabidopsis halleri
Araha.27285s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold27285: 4105-4604 Arabidopsis halleri
Araha.27285s0002 0.5kb downstream 0.5kb downstream 2504 true Scaffold27285: 1601-4104 Arabidopsis halleri
Araha.27285s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold27285: 1601-2100 Arabidopsis halleri
Araha.27285s0002 1.0kb upstream 1.0kb upstream 3004 true Scaffold27285: 2101-5104 Arabidopsis halleri
Araha.27285s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold27285: 4105-5104 Arabidopsis halleri
Araha.27285s0002 1.0kb downstream 1.0kb downstream 3004 true Scaffold27285: 1101-4104 Arabidopsis halleri
Araha.27285s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold27285: 1101-2100 Arabidopsis halleri
Araha.27285s0002 2.0kb upstream 2.0kb upstream 4004 true Scaffold27285: 2101-6104 Arabidopsis halleri
Araha.27285s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold27285: 4105-6104 Arabidopsis halleri
Araha.27285s0002 2.0kb downstream 2.0kb downstream 4004 true Scaffold27285: 101-4104 Arabidopsis halleri
Araha.27285s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold27285: 101-2100 Arabidopsis halleri
Araha.27285s0002 5.0kb upstream 5.0kb upstream 7004 true Scaffold27285: 2101-9104 Arabidopsis halleri
Araha.27285s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold27285: 4105-9104 Arabidopsis halleri
Araha.27285s0002 5.0kb downstream 5.0kb downstream 4104 true Scaffold27285: 1-4104 Arabidopsis halleri
Araha.27285s0002 5.0kb downstream 5.0kb downstream 2100 false Scaffold27285: 1-2100 Arabidopsis halleri
Araha.27285s0002 10.0kb upstream 10.0kb upstream 7029 true Scaffold27285: 2101-9129 Arabidopsis halleri
Araha.27285s0002 10.0kb upstream 10.0kb upstream 5025 false Scaffold27285: 4105-9129 Arabidopsis halleri
Araha.27285s0002 10.0kb downstream 10.0kb downstream 4104 true Scaffold27285: 1-4104 Arabidopsis halleri
Araha.27285s0002 10.0kb downstream 10.0kb downstream 2100 false Scaffold27285: 1-2100 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375787 5261 Brassicaceae View MSA
123801056 5264 Brassicales-Malvales View MSA
124298400 5266 SBM View MSA
124150052 5268 Malvidae View MSA
124072008 5270 Rosid View MSA
123749922 5271 Pentapetalae View MSA
122795074 5272 Eudicot View MSA
122049561 5273 Angiosperm View MSA
121311475 5274 Embryophyte View MSA
123348768 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain