Gene : Araha.27257s0001 A. halleri v1.1
Defline:  (1 of 2) PTHR22572:SF101 - GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE SMALL SUBUNIT, CHLOROPLASTIC Genomic Order:  1
Name:  ? Araha.27257s0001 Secondary Identifier:  ? PAC:28838160
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri GLYCOGENSYNTH-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-622 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.27257s0001 0.5kb upstream 0.5kb upstream 2328 true Scaffold27257: 3845-6172 Arabidopsis halleri
Araha.27257s0001 0.5kb upstream 0.5kb upstream 2 false Scaffold27257: 6171-6172 Arabidopsis halleri
Araha.27257s0001 0.5kb downstream 0.5kb downstream 2826 true Scaffold27257: 3345-6170 Arabidopsis halleri
Araha.27257s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold27257: 3345-3844 Arabidopsis halleri
Araha.27257s0001 1.0kb upstream 1.0kb upstream 2328 true Scaffold27257: 3845-6172 Arabidopsis halleri
Araha.27257s0001 1.0kb upstream 1.0kb upstream 2 false Scaffold27257: 6171-6172 Arabidopsis halleri
Araha.27257s0001 1.0kb downstream 1.0kb downstream 3326 true Scaffold27257: 2845-6170 Arabidopsis halleri
Araha.27257s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold27257: 2845-3844 Arabidopsis halleri
Araha.27257s0001 2.0kb upstream 2.0kb upstream 2328 true Scaffold27257: 3845-6172 Arabidopsis halleri
Araha.27257s0001 2.0kb upstream 2.0kb upstream 2 false Scaffold27257: 6171-6172 Arabidopsis halleri
Araha.27257s0001 2.0kb downstream 2.0kb downstream 4326 true Scaffold27257: 1845-6170 Arabidopsis halleri
Araha.27257s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold27257: 1845-3844 Arabidopsis halleri
Araha.27257s0001 5.0kb upstream 5.0kb upstream 2328 true Scaffold27257: 3845-6172 Arabidopsis halleri
Araha.27257s0001 5.0kb upstream 5.0kb upstream 2 false Scaffold27257: 6171-6172 Arabidopsis halleri
Araha.27257s0001 5.0kb downstream 5.0kb downstream 6170 true Scaffold27257: 1-6170 Arabidopsis halleri
Araha.27257s0001 5.0kb downstream 5.0kb downstream 3844 false Scaffold27257: 1-3844 Arabidopsis halleri
Araha.27257s0001 10.0kb upstream 10.0kb upstream 2328 true Scaffold27257: 3845-6172 Arabidopsis halleri
Araha.27257s0001 10.0kb upstream 10.0kb upstream 2 false Scaffold27257: 6171-6172 Arabidopsis halleri
Araha.27257s0001 10.0kb downstream 10.0kb downstream 6170 true Scaffold27257: 1-6170 Arabidopsis halleri
Araha.27257s0001 10.0kb downstream 10.0kb downstream 3844 false Scaffold27257: 1-3844 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362214 5261 Brassicaceae View MSA
123836919 5264 Brassicales-Malvales View MSA
124346329 5266 SBM View MSA
124239749 5268 Malvidae View MSA
124067564 5270 Rosid View MSA
123737587 5271 Pentapetalae View MSA
122787627 5272 Eudicot View MSA
122044250 5273 Angiosperm View MSA
121350002 5274 Embryophyte View MSA
123424956 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain