Gene : Araha.27686s0001 A. halleri v1.1
Defline:  (1 of 2) PTHR11946:SF7 - LEUCINE--TRNA LIGASE, MITOCHONDRIAL-RELATED Genomic Order:  1
Name:  ? Araha.27686s0001 Secondary Identifier:  ? PAC:28857201
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri TRNA-CHARGING-PWY Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.27686s0001 0.5kb upstream 0.5kb upstream 5392 true Scaffold27686: 7401-12792 Arabidopsis halleri
Araha.27686s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold27686: 7401-7900 Arabidopsis halleri
Araha.27686s0001 0.5kb downstream 0.5kb downstream 5392 true Scaffold27686: 7901-13292 Arabidopsis halleri
Araha.27686s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold27686: 12793-13292 Arabidopsis halleri
Araha.27686s0001 1.0kb upstream 1.0kb upstream 5892 true Scaffold27686: 6901-12792 Arabidopsis halleri
Araha.27686s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold27686: 6901-7900 Arabidopsis halleri
Araha.27686s0001 1.0kb downstream 1.0kb downstream 5892 true Scaffold27686: 7901-13792 Arabidopsis halleri
Araha.27686s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold27686: 12793-13792 Arabidopsis halleri
Araha.27686s0001 2.0kb upstream 2.0kb upstream 6892 true Scaffold27686: 5901-12792 Arabidopsis halleri
Araha.27686s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold27686: 5901-7900 Arabidopsis halleri
Araha.27686s0001 2.0kb downstream 2.0kb downstream 6892 true Scaffold27686: 7901-14792 Arabidopsis halleri
Araha.27686s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold27686: 12793-14792 Arabidopsis halleri
Araha.27686s0001 5.0kb upstream 5.0kb upstream 9892 true Scaffold27686: 2901-12792 Arabidopsis halleri
Araha.27686s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold27686: 2901-7900 Arabidopsis halleri
Araha.27686s0001 5.0kb downstream 5.0kb downstream 9892 true Scaffold27686: 7901-17792 Arabidopsis halleri
Araha.27686s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold27686: 12793-17792 Arabidopsis halleri
Araha.27686s0001 10.0kb upstream 10.0kb upstream 12792 true Scaffold27686: 1-12792 Arabidopsis halleri
Araha.27686s0001 10.0kb upstream 10.0kb upstream 7900 false Scaffold27686: 1-7900 Arabidopsis halleri
Araha.27686s0001 10.0kb downstream 10.0kb downstream 14892 true Scaffold27686: 7901-22792 Arabidopsis halleri
Araha.27686s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold27686: 12793-22792 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041369 5273 Angiosperm View MSA
122361495 5261 Brassicaceae View MSA
123829481 5264 Brassicales-Malvales View MSA
124336430 5266 SBM View MSA
124239362 5268 Malvidae View MSA
124073421 5270 Rosid View MSA
123749958 5271 Pentapetalae View MSA
122789048 5272 Eudicot View MSA
121347479 5274 Embryophyte View MSA
123424257 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain