Gene : Araha.27646s0001 A. halleri v1.1
Defline:  (1 of 3) 2.7.8.11//6.2.1.3 - CDP-diacylglycerol--inositol 3-phosphatidyltransferase / Phosphatidylinositol synthase // Long-chain-fatty-acid--CoA ligase / Lignoceroyl-CoA synthase Genomic Order:  1
Name:  ? Araha.27646s0001 Secondary Identifier:  ? PAC:28860137
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Sequence Feature Displayer

Ontology Annotation Displayer

15 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-1121 Arabidopsis halleri pathologic  
Ahalleri PWY-321 Arabidopsis halleri pathologic  
Ahalleri PWY-5136 Arabidopsis halleri pathologic  
Ahalleri PWY-5143 Arabidopsis halleri pathologic  
Ahalleri PWY-5147 Arabidopsis halleri pathologic  
Ahalleri PWY-5156 Arabidopsis halleri pathologic  
Ahalleri PWY-561 Arabidopsis halleri pathologic  
Ahalleri PWY-5885 Arabidopsis halleri pathologic  
Ahalleri PWY-5971 Arabidopsis halleri pathologic  
Ahalleri PWY-5989 Arabidopsis halleri pathologic  
Ahalleri PWY-6351 Arabidopsis halleri pathologic  
Ahalleri PWY-6352 Arabidopsis halleri pathologic  
Ahalleri PWY-6733 Arabidopsis halleri pathologic  
Ahalleri PWY-6803 Arabidopsis halleri pathologic  
Ahalleri PWY-7625 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.27646s0001 0.5kb upstream 0.5kb upstream 5241 true Scaffold27646: 3486-8726 Arabidopsis halleri
Araha.27646s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold27646: 3486-3985 Arabidopsis halleri
Araha.27646s0001 0.5kb downstream 0.5kb downstream 5241 true Scaffold27646: 3986-9226 Arabidopsis halleri
Araha.27646s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold27646: 8727-9226 Arabidopsis halleri
Araha.27646s0001 1.0kb upstream 1.0kb upstream 5741 true Scaffold27646: 2986-8726 Arabidopsis halleri
Araha.27646s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold27646: 2986-3985 Arabidopsis halleri
Araha.27646s0001 1.0kb downstream 1.0kb downstream 5741 true Scaffold27646: 3986-9726 Arabidopsis halleri
Araha.27646s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold27646: 8727-9726 Arabidopsis halleri
Araha.27646s0001 2.0kb upstream 2.0kb upstream 6741 true Scaffold27646: 1986-8726 Arabidopsis halleri
Araha.27646s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold27646: 1986-3985 Arabidopsis halleri
Araha.27646s0001 2.0kb downstream 2.0kb downstream 6741 true Scaffold27646: 3986-10726 Arabidopsis halleri
Araha.27646s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold27646: 8727-10726 Arabidopsis halleri
Araha.27646s0001 5.0kb upstream 5.0kb upstream 8726 true Scaffold27646: 1-8726 Arabidopsis halleri
Araha.27646s0001 5.0kb upstream 5.0kb upstream 3985 false Scaffold27646: 1-3985 Arabidopsis halleri
Araha.27646s0001 5.0kb downstream 5.0kb downstream 9741 true Scaffold27646: 3986-13726 Arabidopsis halleri
Araha.27646s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold27646: 8727-13726 Arabidopsis halleri
Araha.27646s0001 10.0kb upstream 10.0kb upstream 8726 true Scaffold27646: 1-8726 Arabidopsis halleri
Araha.27646s0001 10.0kb upstream 10.0kb upstream 3985 false Scaffold27646: 1-3985 Arabidopsis halleri
Araha.27646s0001 10.0kb downstream 10.0kb downstream 14741 true Scaffold27646: 3986-18726 Arabidopsis halleri
Araha.27646s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold27646: 8727-18726 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375079 5261 Brassicaceae View MSA
123800873 5264 Brassicales-Malvales View MSA
124298235 5266 SBM View MSA
124149930 5268 Malvidae View MSA
124069008 5270 Rosid View MSA
123751064 5271 Pentapetalae View MSA
122791747 5272 Eudicot View MSA
122047711 5273 Angiosperm View MSA
121350386 5274 Embryophyte View MSA
123426542 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain