Gene : Araha.8497s0003 A. halleri v1.1

Defline:  (1 of 2) PTHR12634:SF8 - PROTEIN SAPS-1, ISOFORM C Genomic Order:  3
Name:  ? Araha.8497s0003 Secondary Identifier:  ? PAC:28849961

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.8497s0003 0.5kb upstream 0.5kb upstream 5012 true Scaffold8497: 6258-11269 Arabidopsis halleri
Araha.8497s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold8497: 6258-6757 Arabidopsis halleri
Araha.8497s0003 0.5kb downstream 0.5kb downstream 5012 true Scaffold8497: 6758-11769 Arabidopsis halleri
Araha.8497s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold8497: 11270-11769 Arabidopsis halleri
Araha.8497s0003 1.0kb upstream 1.0kb upstream 5512 true Scaffold8497: 5758-11269 Arabidopsis halleri
Araha.8497s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold8497: 5758-6757 Arabidopsis halleri
Araha.8497s0003 1.0kb downstream 1.0kb downstream 5512 true Scaffold8497: 6758-12269 Arabidopsis halleri
Araha.8497s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold8497: 11270-12269 Arabidopsis halleri
Araha.8497s0003 2.0kb upstream 2.0kb upstream 6512 true Scaffold8497: 4758-11269 Arabidopsis halleri
Araha.8497s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold8497: 4758-6757 Arabidopsis halleri
Araha.8497s0003 2.0kb downstream 2.0kb downstream 6512 true Scaffold8497: 6758-13269 Arabidopsis halleri
Araha.8497s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold8497: 11270-13269 Arabidopsis halleri
Araha.8497s0003 5.0kb upstream 5.0kb upstream 9512 true Scaffold8497: 1758-11269 Arabidopsis halleri
Araha.8497s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold8497: 1758-6757 Arabidopsis halleri
Araha.8497s0003 5.0kb downstream 5.0kb downstream 9256 true Scaffold8497: 6758-16013 Arabidopsis halleri
Araha.8497s0003 5.0kb downstream 5.0kb downstream 4744 false Scaffold8497: 11270-16013 Arabidopsis halleri
Araha.8497s0003 10.0kb upstream 10.0kb upstream 11269 true Scaffold8497: 1-11269 Arabidopsis halleri
Araha.8497s0003 10.0kb upstream 10.0kb upstream 6757 false Scaffold8497: 1-6757 Arabidopsis halleri
Araha.8497s0003 10.0kb downstream 10.0kb downstream 9256 true Scaffold8497: 6758-16013 Arabidopsis halleri
Araha.8497s0003 10.0kb downstream 10.0kb downstream 4744 false Scaffold8497: 11270-16013 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368962 5261 Brassicaceae View MSA
123838110 5264 Brassicales-Malvales View MSA
124322399 5266 SBM View MSA
124169134 5268 Malvidae View MSA
124069403 5270 Rosid View MSA
123742234 5271 Pentapetalae View MSA
122794805 5272 Eudicot View MSA
122051052 5273 Angiosperm View MSA
121347725 5274 Embryophyte View MSA
123428189 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain