Gene : Araha.27096s0003 A. halleri v1.1
Defline:  (1 of 1) PTHR22769:SF7 - PEROXISOMAL NADH PYROPHOSPHATASE NUDT12 Genomic Order:  3
Name:  ? Araha.27096s0003 Secondary Identifier:  ? PAC:28850691
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-5381 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.27096s0003 0.5kb upstream 0.5kb upstream 2758 true Scaffold27096: 8070-10827 Arabidopsis halleri
Araha.27096s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold27096: 8070-8569 Arabidopsis halleri
Araha.27096s0003 0.5kb downstream 0.5kb downstream 2758 true Scaffold27096: 8570-11327 Arabidopsis halleri
Araha.27096s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold27096: 10828-11327 Arabidopsis halleri
Araha.27096s0003 1.0kb upstream 1.0kb upstream 3258 true Scaffold27096: 7570-10827 Arabidopsis halleri
Araha.27096s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold27096: 7570-8569 Arabidopsis halleri
Araha.27096s0003 1.0kb downstream 1.0kb downstream 3258 true Scaffold27096: 8570-11827 Arabidopsis halleri
Araha.27096s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold27096: 10828-11827 Arabidopsis halleri
Araha.27096s0003 2.0kb upstream 2.0kb upstream 4258 true Scaffold27096: 6570-10827 Arabidopsis halleri
Araha.27096s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold27096: 6570-8569 Arabidopsis halleri
Araha.27096s0003 2.0kb downstream 2.0kb downstream 4258 true Scaffold27096: 8570-12827 Arabidopsis halleri
Araha.27096s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold27096: 10828-12827 Arabidopsis halleri
Araha.27096s0003 5.0kb upstream 5.0kb upstream 7258 true Scaffold27096: 3570-10827 Arabidopsis halleri
Araha.27096s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold27096: 3570-8569 Arabidopsis halleri
Araha.27096s0003 5.0kb downstream 5.0kb downstream 7258 true Scaffold27096: 8570-15827 Arabidopsis halleri
Araha.27096s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold27096: 10828-15827 Arabidopsis halleri
Araha.27096s0003 10.0kb upstream 10.0kb upstream 10827 true Scaffold27096: 1-10827 Arabidopsis halleri
Araha.27096s0003 10.0kb upstream 10.0kb upstream 8569 false Scaffold27096: 1-8569 Arabidopsis halleri
Araha.27096s0003 10.0kb downstream 10.0kb downstream 12258 true Scaffold27096: 8570-20827 Arabidopsis halleri
Araha.27096s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold27096: 10828-20827 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370548 5261 Brassicaceae View MSA
123834186 5264 Brassicales-Malvales View MSA
124350331 5266 SBM View MSA
124243566 5268 Malvidae View MSA
124065402 5270 Rosid View MSA
123742146 5271 Pentapetalae View MSA
122787569 5272 Eudicot View MSA
122041659 5273 Angiosperm View MSA
121345450 5274 Embryophyte View MSA
123427123 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain