Gene : Araha.28394s0004 A. halleri v1.1

Genomic Order:  4 Name:  ? Araha.28394s0004
Secondary Identifier:  ? PAC:28841618

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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.28394s0004 0.5kb upstream 0.5kb upstream 2281 true Scaffold28394: 27463-29743 Arabidopsis halleri
Araha.28394s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold28394: 29244-29743 Arabidopsis halleri
Araha.28394s0004 0.5kb downstream 0.5kb downstream 2281 true Scaffold28394: 26963-29243 Arabidopsis halleri
Araha.28394s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold28394: 26963-27462 Arabidopsis halleri
Araha.28394s0004 1.0kb upstream 1.0kb upstream 2781 true Scaffold28394: 27463-30243 Arabidopsis halleri
Araha.28394s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold28394: 29244-30243 Arabidopsis halleri
Araha.28394s0004 1.0kb downstream 1.0kb downstream 2781 true Scaffold28394: 26463-29243 Arabidopsis halleri
Araha.28394s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold28394: 26463-27462 Arabidopsis halleri
Araha.28394s0004 2.0kb upstream 2.0kb upstream 3781 true Scaffold28394: 27463-31243 Arabidopsis halleri
Araha.28394s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold28394: 29244-31243 Arabidopsis halleri
Araha.28394s0004 2.0kb downstream 2.0kb downstream 3781 true Scaffold28394: 25463-29243 Arabidopsis halleri
Araha.28394s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold28394: 25463-27462 Arabidopsis halleri
Araha.28394s0004 5.0kb upstream 5.0kb upstream 6781 true Scaffold28394: 27463-34243 Arabidopsis halleri
Araha.28394s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold28394: 29244-34243 Arabidopsis halleri
Araha.28394s0004 5.0kb downstream 5.0kb downstream 6781 true Scaffold28394: 22463-29243 Arabidopsis halleri
Araha.28394s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold28394: 22463-27462 Arabidopsis halleri
Araha.28394s0004 10.0kb upstream 10.0kb upstream 11781 true Scaffold28394: 27463-39243 Arabidopsis halleri
Araha.28394s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold28394: 29244-39243 Arabidopsis halleri
Araha.28394s0004 10.0kb downstream 10.0kb downstream 11781 true Scaffold28394: 17463-29243 Arabidopsis halleri
Araha.28394s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold28394: 17463-27462 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361108 5261 Brassicaceae View MSA
123836542 5264 Brassicales-Malvales View MSA
124345169 5266 SBM View MSA
124242339 5268 Malvidae View MSA
124064303 5270 Rosid View MSA
123745540 5271 Pentapetalae View MSA
122794464 5272 Eudicot View MSA
122043827 5273 Angiosperm View MSA
121348522 5274 Embryophyte View MSA
123380896 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain