Gene : Araha.28272s0004 A. halleri v1.1
Defline:  (1 of 2) PTHR21049 - RIBOPHORIN I Genomic Order:  4
Name:  ? Araha.28272s0004 Secondary Identifier:  ? PAC:28849829
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Arabidopsis halleri pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.28272s0004 0.5kb upstream 0.5kb upstream 3804 true Scaffold28272: 11615-15418 Arabidopsis halleri
Araha.28272s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold28272: 14919-15418 Arabidopsis halleri
Araha.28272s0004 0.5kb downstream 0.5kb downstream 3804 true Scaffold28272: 11115-14918 Arabidopsis halleri
Araha.28272s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold28272: 11115-11614 Arabidopsis halleri
Araha.28272s0004 1.0kb upstream 1.0kb upstream 4304 true Scaffold28272: 11615-15918 Arabidopsis halleri
Araha.28272s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold28272: 14919-15918 Arabidopsis halleri
Araha.28272s0004 1.0kb downstream 1.0kb downstream 4304 true Scaffold28272: 10615-14918 Arabidopsis halleri
Araha.28272s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold28272: 10615-11614 Arabidopsis halleri
Araha.28272s0004 2.0kb upstream 2.0kb upstream 5304 true Scaffold28272: 11615-16918 Arabidopsis halleri
Araha.28272s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold28272: 14919-16918 Arabidopsis halleri
Araha.28272s0004 2.0kb downstream 2.0kb downstream 5304 true Scaffold28272: 9615-14918 Arabidopsis halleri
Araha.28272s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold28272: 9615-11614 Arabidopsis halleri
Araha.28272s0004 5.0kb upstream 5.0kb upstream 8304 true Scaffold28272: 11615-19918 Arabidopsis halleri
Araha.28272s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold28272: 14919-19918 Arabidopsis halleri
Araha.28272s0004 5.0kb downstream 5.0kb downstream 8304 true Scaffold28272: 6615-14918 Arabidopsis halleri
Araha.28272s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold28272: 6615-11614 Arabidopsis halleri
Araha.28272s0004 10.0kb upstream 10.0kb upstream 10899 true Scaffold28272: 11615-22513 Arabidopsis halleri
Araha.28272s0004 10.0kb upstream 10.0kb upstream 7595 false Scaffold28272: 14919-22513 Arabidopsis halleri
Araha.28272s0004 10.0kb downstream 10.0kb downstream 13304 true Scaffold28272: 1615-14918 Arabidopsis halleri
Araha.28272s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold28272: 1615-11614 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368155 5261 Brassicaceae View MSA
123839296 5264 Brassicales-Malvales View MSA
124338383 5266 SBM View MSA
124238095 5268 Malvidae View MSA
124062432 5270 Rosid View MSA
123739832 5271 Pentapetalae View MSA
122788147 5272 Eudicot View MSA
122045839 5273 Angiosperm View MSA
121344517 5274 Embryophyte View MSA
123425585 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain