Gene : Araha.28740s0003 A. halleri v1.1

Defline:  (1 of 69) PTHR32410:SF152 - C1 DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  3
Name:  ? Araha.28740s0003 Secondary Identifier:  ? PAC:28845568

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.28740s0003 0.5kb upstream 0.5kb upstream 3565 true Scaffold28740: 14470-18034 Arabidopsis halleri
Araha.28740s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold28740: 17535-18034 Arabidopsis halleri
Araha.28740s0003 0.5kb downstream 0.5kb downstream 3565 true Scaffold28740: 13970-17534 Arabidopsis halleri
Araha.28740s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold28740: 13970-14469 Arabidopsis halleri
Araha.28740s0003 1.0kb upstream 1.0kb upstream 4065 true Scaffold28740: 14470-18534 Arabidopsis halleri
Araha.28740s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold28740: 17535-18534 Arabidopsis halleri
Araha.28740s0003 1.0kb downstream 1.0kb downstream 4065 true Scaffold28740: 13470-17534 Arabidopsis halleri
Araha.28740s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold28740: 13470-14469 Arabidopsis halleri
Araha.28740s0003 2.0kb upstream 2.0kb upstream 5065 true Scaffold28740: 14470-19534 Arabidopsis halleri
Araha.28740s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold28740: 17535-19534 Arabidopsis halleri
Araha.28740s0003 2.0kb downstream 2.0kb downstream 5065 true Scaffold28740: 12470-17534 Arabidopsis halleri
Araha.28740s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold28740: 12470-14469 Arabidopsis halleri
Araha.28740s0003 5.0kb upstream 5.0kb upstream 5397 true Scaffold28740: 14470-19866 Arabidopsis halleri
Araha.28740s0003 5.0kb upstream 5.0kb upstream 2332 false Scaffold28740: 17535-19866 Arabidopsis halleri
Araha.28740s0003 5.0kb downstream 5.0kb downstream 8065 true Scaffold28740: 9470-17534 Arabidopsis halleri
Araha.28740s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold28740: 9470-14469 Arabidopsis halleri
Araha.28740s0003 10.0kb upstream 10.0kb upstream 5397 true Scaffold28740: 14470-19866 Arabidopsis halleri
Araha.28740s0003 10.0kb upstream 10.0kb upstream 2332 false Scaffold28740: 17535-19866 Arabidopsis halleri
Araha.28740s0003 10.0kb downstream 10.0kb downstream 13065 true Scaffold28740: 4470-17534 Arabidopsis halleri
Araha.28740s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold28740: 4470-14469 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377625 5261 Brassicaceae View MSA
123832693 5264 Brassicales-Malvales View MSA
124350505 5266 SBM View MSA
124245070 5268 Malvidae View MSA
124070692 5270 Rosid View MSA
123751823 5271 Pentapetalae View MSA
122797568 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain