Gene : Araha.8816s0001 A. halleri v1.1

Defline:  (1 of 1) PTHR12732 - UNCHARACTERIZED PROTEASOME COMPONENT REGION PCI-CONTAINING Genomic Order:  1
Name:  ? Araha.8816s0001 Secondary Identifier:  ? PAC:28858168

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.8816s0001 0.5kb upstream 0.5kb upstream 3125 true Scaffold8816: 3949-7073 Arabidopsis halleri
Araha.8816s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold8816: 3949-4448 Arabidopsis halleri
Araha.8816s0001 0.5kb downstream 0.5kb downstream 3125 true Scaffold8816: 4449-7573 Arabidopsis halleri
Araha.8816s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold8816: 7074-7573 Arabidopsis halleri
Araha.8816s0001 1.0kb upstream 1.0kb upstream 3625 true Scaffold8816: 3449-7073 Arabidopsis halleri
Araha.8816s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold8816: 3449-4448 Arabidopsis halleri
Araha.8816s0001 1.0kb downstream 1.0kb downstream 3625 true Scaffold8816: 4449-8073 Arabidopsis halleri
Araha.8816s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold8816: 7074-8073 Arabidopsis halleri
Araha.8816s0001 2.0kb upstream 2.0kb upstream 4625 true Scaffold8816: 2449-7073 Arabidopsis halleri
Araha.8816s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold8816: 2449-4448 Arabidopsis halleri
Araha.8816s0001 2.0kb downstream 2.0kb downstream 4625 true Scaffold8816: 4449-9073 Arabidopsis halleri
Araha.8816s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold8816: 7074-9073 Arabidopsis halleri
Araha.8816s0001 5.0kb upstream 5.0kb upstream 7073 true Scaffold8816: 1-7073 Arabidopsis halleri
Araha.8816s0001 5.0kb upstream 5.0kb upstream 4448 false Scaffold8816: 1-4448 Arabidopsis halleri
Araha.8816s0001 5.0kb downstream 5.0kb downstream 7625 true Scaffold8816: 4449-12073 Arabidopsis halleri
Araha.8816s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold8816: 7074-12073 Arabidopsis halleri
Araha.8816s0001 10.0kb upstream 10.0kb upstream 7073 true Scaffold8816: 1-7073 Arabidopsis halleri
Araha.8816s0001 10.0kb upstream 10.0kb upstream 4448 false Scaffold8816: 1-4448 Arabidopsis halleri
Araha.8816s0001 10.0kb downstream 10.0kb downstream 12625 true Scaffold8816: 4449-17073 Arabidopsis halleri
Araha.8816s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold8816: 7074-17073 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026380 5273 Angiosperm View MSA
122360825 5261 Brassicaceae View MSA
123830412 5264 Brassicales-Malvales View MSA
124337129 5266 SBM View MSA
124241035 5268 Malvidae View MSA
124065279 5270 Rosid View MSA
123739709 5271 Pentapetalae View MSA
122792868 5272 Eudicot View MSA
121343873 5274 Embryophyte View MSA
123424349 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain