Gene : Araha.8819s0003 A. halleri v1.1
Defline:  (1 of 1) PTHR11879:SF1 - ASPARTATE AMINOTRANSFERASE, CHLOROPLASTIC Genomic Order:  3
Name:  ? Araha.8819s0003 Secondary Identifier:  ? PAC:28852710
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri ASPARTATE-DEG1-PWY Arabidopsis halleri pathologic  
Ahalleri ASPARTATESYN-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-3001 Arabidopsis halleri pathologic  
Ahalleri PWY-7115 Arabidopsis halleri pathologic  
Ahalleri PWY-7117 Arabidopsis halleri pathologic  
Ahalleri THRESYN-PWY Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.8819s0003 0.5kb upstream 0.5kb upstream 3563 true Scaffold8819: 4749-8311 Arabidopsis halleri
Araha.8819s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold8819: 7812-8311 Arabidopsis halleri
Araha.8819s0003 0.5kb downstream 0.5kb downstream 3563 true Scaffold8819: 4249-7811 Arabidopsis halleri
Araha.8819s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold8819: 4249-4748 Arabidopsis halleri
Araha.8819s0003 1.0kb upstream 1.0kb upstream 4063 true Scaffold8819: 4749-8811 Arabidopsis halleri
Araha.8819s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold8819: 7812-8811 Arabidopsis halleri
Araha.8819s0003 1.0kb downstream 1.0kb downstream 4063 true Scaffold8819: 3749-7811 Arabidopsis halleri
Araha.8819s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold8819: 3749-4748 Arabidopsis halleri
Araha.8819s0003 2.0kb upstream 2.0kb upstream 5063 true Scaffold8819: 4749-9811 Arabidopsis halleri
Araha.8819s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold8819: 7812-9811 Arabidopsis halleri
Araha.8819s0003 2.0kb downstream 2.0kb downstream 5063 true Scaffold8819: 2749-7811 Arabidopsis halleri
Araha.8819s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold8819: 2749-4748 Arabidopsis halleri
Araha.8819s0003 5.0kb upstream 5.0kb upstream 8063 true Scaffold8819: 4749-12811 Arabidopsis halleri
Araha.8819s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold8819: 7812-12811 Arabidopsis halleri
Araha.8819s0003 5.0kb downstream 5.0kb downstream 7811 true Scaffold8819: 1-7811 Arabidopsis halleri
Araha.8819s0003 5.0kb downstream 5.0kb downstream 4748 false Scaffold8819: 1-4748 Arabidopsis halleri
Araha.8819s0003 10.0kb upstream 10.0kb upstream 13063 true Scaffold8819: 4749-17811 Arabidopsis halleri
Araha.8819s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold8819: 7812-17811 Arabidopsis halleri
Araha.8819s0003 10.0kb downstream 10.0kb downstream 7811 true Scaffold8819: 1-7811 Arabidopsis halleri
Araha.8819s0003 10.0kb downstream 10.0kb downstream 4748 false Scaffold8819: 1-4748 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376883 5261 Brassicaceae View MSA
123833369 5264 Brassicales-Malvales View MSA
124341327 5266 SBM View MSA
124241276 5268 Malvidae View MSA
124066749 5270 Rosid View MSA
123740507 5271 Pentapetalae View MSA
122797537 5272 Eudicot View MSA
122048100 5273 Angiosperm View MSA
121346908 5274 Embryophyte View MSA
123424622 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain