Gene : Araha.8772s0001 A. halleri v1.1
Defline:  (1 of 46) 3.2.1.15 - Polygalacturonase / Pectinase Genomic Order:  1
Name:  ? Araha.8772s0001 Secondary Identifier:  ? PAC:28841274
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-1081 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.8772s0001 0.5kb upstream 0.5kb upstream 3392 true Scaffold8772: 7711-11102 Arabidopsis halleri
Araha.8772s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold8772: 7711-8210 Arabidopsis halleri
Araha.8772s0001 0.5kb downstream 0.5kb downstream 3392 true Scaffold8772: 8211-11602 Arabidopsis halleri
Araha.8772s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold8772: 11103-11602 Arabidopsis halleri
Araha.8772s0001 1.0kb upstream 1.0kb upstream 3892 true Scaffold8772: 7211-11102 Arabidopsis halleri
Araha.8772s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold8772: 7211-8210 Arabidopsis halleri
Araha.8772s0001 1.0kb downstream 1.0kb downstream 3892 true Scaffold8772: 8211-12102 Arabidopsis halleri
Araha.8772s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold8772: 11103-12102 Arabidopsis halleri
Araha.8772s0001 2.0kb upstream 2.0kb upstream 4892 true Scaffold8772: 6211-11102 Arabidopsis halleri
Araha.8772s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold8772: 6211-8210 Arabidopsis halleri
Araha.8772s0001 2.0kb downstream 2.0kb downstream 4892 true Scaffold8772: 8211-13102 Arabidopsis halleri
Araha.8772s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold8772: 11103-13102 Arabidopsis halleri
Araha.8772s0001 5.0kb upstream 5.0kb upstream 7892 true Scaffold8772: 3211-11102 Arabidopsis halleri
Araha.8772s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold8772: 3211-8210 Arabidopsis halleri
Araha.8772s0001 5.0kb downstream 5.0kb downstream 7892 true Scaffold8772: 8211-16102 Arabidopsis halleri
Araha.8772s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold8772: 11103-16102 Arabidopsis halleri
Araha.8772s0001 10.0kb upstream 10.0kb upstream 11102 true Scaffold8772: 1-11102 Arabidopsis halleri
Araha.8772s0001 10.0kb upstream 10.0kb upstream 8210 false Scaffold8772: 1-8210 Arabidopsis halleri
Araha.8772s0001 10.0kb downstream 10.0kb downstream 12892 true Scaffold8772: 8211-21102 Arabidopsis halleri
Araha.8772s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold8772: 11103-21102 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372611 5261 Brassicaceae View MSA
123835792 5264 Brassicales-Malvales View MSA
124337988 5266 SBM View MSA
124242051 5268 Malvidae View MSA
124065487 5270 Rosid View MSA
123736627 5271 Pentapetalae View MSA
122795582 5272 Eudicot View MSA
122048646 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain