Gene : Araha.27797s0006 A. halleri v1.1
Defline:  (1 of 1) 2.1.1.148 - Thymidylate synthase (FAD) / Flavin dependent thymidylate synthase Genomic Order:  6
Name:  ? Araha.27797s0006 Secondary Identifier:  ? PAC:28860342
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-6545 Arabidopsis halleri pathologic  
Ahalleri TRPSYN-PWY Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.27797s0006 0.5kb upstream 0.5kb upstream 2937 true Scaffold27797: 25800-28736 Arabidopsis halleri
Araha.27797s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold27797: 25800-26299 Arabidopsis halleri
Araha.27797s0006 0.5kb downstream 0.5kb downstream 2937 true Scaffold27797: 26300-29236 Arabidopsis halleri
Araha.27797s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold27797: 28737-29236 Arabidopsis halleri
Araha.27797s0006 1.0kb upstream 1.0kb upstream 3437 true Scaffold27797: 25300-28736 Arabidopsis halleri
Araha.27797s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold27797: 25300-26299 Arabidopsis halleri
Araha.27797s0006 1.0kb downstream 1.0kb downstream 3437 true Scaffold27797: 26300-29736 Arabidopsis halleri
Araha.27797s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold27797: 28737-29736 Arabidopsis halleri
Araha.27797s0006 2.0kb upstream 2.0kb upstream 4437 true Scaffold27797: 24300-28736 Arabidopsis halleri
Araha.27797s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold27797: 24300-26299 Arabidopsis halleri
Araha.27797s0006 2.0kb downstream 2.0kb downstream 4437 true Scaffold27797: 26300-30736 Arabidopsis halleri
Araha.27797s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold27797: 28737-30736 Arabidopsis halleri
Araha.27797s0006 5.0kb upstream 5.0kb upstream 7437 true Scaffold27797: 21300-28736 Arabidopsis halleri
Araha.27797s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold27797: 21300-26299 Arabidopsis halleri
Araha.27797s0006 5.0kb downstream 5.0kb downstream 5791 true Scaffold27797: 26300-32090 Arabidopsis halleri
Araha.27797s0006 5.0kb downstream 5.0kb downstream 3354 false Scaffold27797: 28737-32090 Arabidopsis halleri
Araha.27797s0006 10.0kb upstream 10.0kb upstream 12437 true Scaffold27797: 16300-28736 Arabidopsis halleri
Araha.27797s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold27797: 16300-26299 Arabidopsis halleri
Araha.27797s0006 10.0kb downstream 10.0kb downstream 5791 true Scaffold27797: 26300-32090 Arabidopsis halleri
Araha.27797s0006 10.0kb downstream 10.0kb downstream 3354 false Scaffold27797: 28737-32090 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338753 5261 Brassicaceae View MSA
123838470 5264 Brassicales-Malvales View MSA
124346682 5266 SBM View MSA
124240153 5268 Malvidae View MSA
124064882 5270 Rosid View MSA
123744113 5271 Pentapetalae View MSA
122793457 5272 Eudicot View MSA
122041793 5273 Angiosperm View MSA
121344938 5274 Embryophyte View MSA
123424277 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain