Gene : Araha.27996s0003 A. halleri v1.1

Defline:  (1 of 4) PTHR12632:SF12 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-3-RELATED Genomic Order:  3
Name:  ? Araha.27996s0003 Secondary Identifier:  ? PAC:28848435

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.27996s0003 0.5kb upstream 0.5kb upstream 2973 true Scaffold27996: 8024-10996 Arabidopsis halleri
Araha.27996s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold27996: 10497-10996 Arabidopsis halleri
Araha.27996s0003 0.5kb downstream 0.5kb downstream 2973 true Scaffold27996: 7524-10496 Arabidopsis halleri
Araha.27996s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold27996: 7524-8023 Arabidopsis halleri
Araha.27996s0003 1.0kb upstream 1.0kb upstream 3473 true Scaffold27996: 8024-11496 Arabidopsis halleri
Araha.27996s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold27996: 10497-11496 Arabidopsis halleri
Araha.27996s0003 1.0kb downstream 1.0kb downstream 3473 true Scaffold27996: 7024-10496 Arabidopsis halleri
Araha.27996s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold27996: 7024-8023 Arabidopsis halleri
Araha.27996s0003 2.0kb upstream 2.0kb upstream 4473 true Scaffold27996: 8024-12496 Arabidopsis halleri
Araha.27996s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold27996: 10497-12496 Arabidopsis halleri
Araha.27996s0003 2.0kb downstream 2.0kb downstream 4473 true Scaffold27996: 6024-10496 Arabidopsis halleri
Araha.27996s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold27996: 6024-8023 Arabidopsis halleri
Araha.27996s0003 5.0kb upstream 5.0kb upstream 7473 true Scaffold27996: 8024-15496 Arabidopsis halleri
Araha.27996s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold27996: 10497-15496 Arabidopsis halleri
Araha.27996s0003 5.0kb downstream 5.0kb downstream 7473 true Scaffold27996: 3024-10496 Arabidopsis halleri
Araha.27996s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold27996: 3024-8023 Arabidopsis halleri
Araha.27996s0003 10.0kb upstream 10.0kb upstream 12473 true Scaffold27996: 8024-20496 Arabidopsis halleri
Araha.27996s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold27996: 10497-20496 Arabidopsis halleri
Araha.27996s0003 10.0kb downstream 10.0kb downstream 10496 true Scaffold27996: 1-10496 Arabidopsis halleri
Araha.27996s0003 10.0kb downstream 10.0kb downstream 8023 false Scaffold27996: 1-8023 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362421 5261 Brassicaceae View MSA
123835050 5264 Brassicales-Malvales View MSA
124350365 5266 SBM View MSA
124248433 5268 Malvidae View MSA
124071541 5270 Rosid View MSA
123747394 5271 Pentapetalae View MSA
122791430 5272 Eudicot View MSA
122049545 5273 Angiosperm View MSA
121349728 5274 Embryophyte View MSA
123424382 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain