Gene : Araha.29796s0002 A. halleri v1.1
Defline:  (1 of 1) PTHR30373:SF2 - UPF0603 PROTEIN YGCG Genomic Order:  2
Name:  ? Araha.29796s0002 Secondary Identifier:  ? PAC:28854778
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-5083 Arabidopsis halleri pathologic  
Ahalleri PWY-6348 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.29796s0002 0.5kb upstream 0.5kb upstream 3555 true Scaffold29796: 2268-5822 Arabidopsis halleri
Araha.29796s0002 0.5kb upstream 0.5kb upstream 435 false Scaffold29796: 5388-5822 Arabidopsis halleri
Araha.29796s0002 0.5kb downstream 0.5kb downstream 3620 true Scaffold29796: 1768-5387 Arabidopsis halleri
Araha.29796s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold29796: 1768-2267 Arabidopsis halleri
Araha.29796s0002 1.0kb upstream 1.0kb upstream 3555 true Scaffold29796: 2268-5822 Arabidopsis halleri
Araha.29796s0002 1.0kb upstream 1.0kb upstream 435 false Scaffold29796: 5388-5822 Arabidopsis halleri
Araha.29796s0002 1.0kb downstream 1.0kb downstream 4120 true Scaffold29796: 1268-5387 Arabidopsis halleri
Araha.29796s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold29796: 1268-2267 Arabidopsis halleri
Araha.29796s0002 2.0kb upstream 2.0kb upstream 3555 true Scaffold29796: 2268-5822 Arabidopsis halleri
Araha.29796s0002 2.0kb upstream 2.0kb upstream 435 false Scaffold29796: 5388-5822 Arabidopsis halleri
Araha.29796s0002 2.0kb downstream 2.0kb downstream 5120 true Scaffold29796: 268-5387 Arabidopsis halleri
Araha.29796s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold29796: 268-2267 Arabidopsis halleri
Araha.29796s0002 5.0kb upstream 5.0kb upstream 3555 true Scaffold29796: 2268-5822 Arabidopsis halleri
Araha.29796s0002 5.0kb upstream 5.0kb upstream 435 false Scaffold29796: 5388-5822 Arabidopsis halleri
Araha.29796s0002 5.0kb downstream 5.0kb downstream 5387 true Scaffold29796: 1-5387 Arabidopsis halleri
Araha.29796s0002 5.0kb downstream 5.0kb downstream 2267 false Scaffold29796: 1-2267 Arabidopsis halleri
Araha.29796s0002 10.0kb upstream 10.0kb upstream 3555 true Scaffold29796: 2268-5822 Arabidopsis halleri
Araha.29796s0002 10.0kb upstream 10.0kb upstream 435 false Scaffold29796: 5388-5822 Arabidopsis halleri
Araha.29796s0002 10.0kb downstream 10.0kb downstream 5387 true Scaffold29796: 1-5387 Arabidopsis halleri
Araha.29796s0002 10.0kb downstream 10.0kb downstream 2267 false Scaffold29796: 1-2267 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362877 5261 Brassicaceae View MSA
123830968 5264 Brassicales-Malvales View MSA
124342350 5266 SBM View MSA
124243217 5268 Malvidae View MSA
124061871 5270 Rosid View MSA
123737495 5271 Pentapetalae View MSA
122787639 5272 Eudicot View MSA
122046154 5273 Angiosperm View MSA
121349050 5274 Embryophyte View MSA
123424307 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain