Gene : Araha.28943s0006 A. halleri v1.1
Defline:  (1 of 2) 5.4.99.39//5.4.99.40//5.4.99.41 - Beta-amyrin synthase / 2,3-oxidosqualene beta-amyrin cyclase // Alpha-amyrin synthase / 2,3-oxidosqualene alpha-amyrin cyclase Genomic Order:  6
Name:  ? Araha.28943s0006 Secondary Identifier:  ? PAC:28846322
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-112 Arabidopsis halleri pathologic  
Ahalleri PWY-5377 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.28943s0006 0.5kb upstream 0.5kb upstream 5404 true Scaffold28943: 21841-27244 Arabidopsis halleri
Araha.28943s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold28943: 21841-22340 Arabidopsis halleri
Araha.28943s0006 0.5kb downstream 0.5kb downstream 5404 true Scaffold28943: 22341-27744 Arabidopsis halleri
Araha.28943s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold28943: 27245-27744 Arabidopsis halleri
Araha.28943s0006 1.0kb upstream 1.0kb upstream 5904 true Scaffold28943: 21341-27244 Arabidopsis halleri
Araha.28943s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold28943: 21341-22340 Arabidopsis halleri
Araha.28943s0006 1.0kb downstream 1.0kb downstream 5904 true Scaffold28943: 22341-28244 Arabidopsis halleri
Araha.28943s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold28943: 27245-28244 Arabidopsis halleri
Araha.28943s0006 2.0kb upstream 2.0kb upstream 6904 true Scaffold28943: 20341-27244 Arabidopsis halleri
Araha.28943s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold28943: 20341-22340 Arabidopsis halleri
Araha.28943s0006 2.0kb downstream 2.0kb downstream 6904 true Scaffold28943: 22341-29244 Arabidopsis halleri
Araha.28943s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold28943: 27245-29244 Arabidopsis halleri
Araha.28943s0006 5.0kb upstream 5.0kb upstream 9904 true Scaffold28943: 17341-27244 Arabidopsis halleri
Araha.28943s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold28943: 17341-22340 Arabidopsis halleri
Araha.28943s0006 5.0kb downstream 5.0kb downstream 9904 true Scaffold28943: 22341-32244 Arabidopsis halleri
Araha.28943s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold28943: 27245-32244 Arabidopsis halleri
Araha.28943s0006 10.0kb upstream 10.0kb upstream 14904 true Scaffold28943: 12341-27244 Arabidopsis halleri
Araha.28943s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold28943: 12341-22340 Arabidopsis halleri
Araha.28943s0006 10.0kb downstream 10.0kb downstream 14904 true Scaffold28943: 22341-37244 Arabidopsis halleri
Araha.28943s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold28943: 27245-37244 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122328303 5261 Brassicaceae View MSA
123841762 5264 Brassicales-Malvales View MSA
124323011 5266 SBM View MSA
124255256 5268 Malvidae View MSA
124075439 5270 Rosid View MSA
123750129 5271 Pentapetalae View MSA
122795524 5272 Eudicot View MSA
122043543 5273 Angiosperm View MSA
121345283 5274 Embryophyte View MSA
123424991 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain