Gene : Araha.9024s0003 A. halleri v1.1

Defline:  (1 of 1) PTHR11076:SF38 - DNA POLYMERASE ETA Genomic Order:  3
Name:  ? Araha.9024s0003 Secondary Identifier:  ? PAC:28857779

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.9024s0003 0.5kb upstream 0.5kb upstream 2921 true Scaffold9024: 13629-16549 Arabidopsis halleri
Araha.9024s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold9024: 13629-14128 Arabidopsis halleri
Araha.9024s0003 0.5kb downstream 0.5kb downstream 2921 true Scaffold9024: 14129-17049 Arabidopsis halleri
Araha.9024s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold9024: 16550-17049 Arabidopsis halleri
Araha.9024s0003 1.0kb upstream 1.0kb upstream 3421 true Scaffold9024: 13129-16549 Arabidopsis halleri
Araha.9024s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold9024: 13129-14128 Arabidopsis halleri
Araha.9024s0003 1.0kb downstream 1.0kb downstream 3421 true Scaffold9024: 14129-17549 Arabidopsis halleri
Araha.9024s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold9024: 16550-17549 Arabidopsis halleri
Araha.9024s0003 2.0kb upstream 2.0kb upstream 4421 true Scaffold9024: 12129-16549 Arabidopsis halleri
Araha.9024s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold9024: 12129-14128 Arabidopsis halleri
Araha.9024s0003 2.0kb downstream 2.0kb downstream 4421 true Scaffold9024: 14129-18549 Arabidopsis halleri
Araha.9024s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold9024: 16550-18549 Arabidopsis halleri
Araha.9024s0003 5.0kb upstream 5.0kb upstream 7421 true Scaffold9024: 9129-16549 Arabidopsis halleri
Araha.9024s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold9024: 9129-14128 Arabidopsis halleri
Araha.9024s0003 5.0kb downstream 5.0kb downstream 7421 true Scaffold9024: 14129-21549 Arabidopsis halleri
Araha.9024s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold9024: 16550-21549 Arabidopsis halleri
Araha.9024s0003 10.0kb upstream 10.0kb upstream 12421 true Scaffold9024: 4129-16549 Arabidopsis halleri
Araha.9024s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold9024: 4129-14128 Arabidopsis halleri
Araha.9024s0003 10.0kb downstream 10.0kb downstream 12421 true Scaffold9024: 14129-26549 Arabidopsis halleri
Araha.9024s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold9024: 16550-26549 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121487325 5273 Angiosperm Singleton cluster - no MSA
122321057 5261 Brassicaceae Singleton cluster - no MSA
123762652 5264 Brassicales-Malvales Singleton cluster - no MSA
124261287 5266 SBM Singleton cluster - no MSA
124117906 5268 Malvidae Singleton cluster - no MSA
123847296 5270 Rosid Singleton cluster - no MSA
123433576 5271 Pentapetalae Singleton cluster - no MSA
122469196 5272 Eudicot Singleton cluster - no MSA
120760714 5274 Embryophyte Singleton cluster - no MSA
122803157 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain