Gene : Araha.8907s0004 A. halleri v1.1

Defline:  (1 of 1) PTHR21649:SF14 - PSI TYPE III CHLOROPHYLL A/B-BINDING PROTEIN Genomic Order:  4
Name:  ? Araha.8907s0004 Secondary Identifier:  ? PAC:28861282

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.8907s0004 0.5kb upstream 0.5kb upstream 1716 true Scaffold8907: 28800-30515 Arabidopsis halleri
Araha.8907s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold8907: 28800-29299 Arabidopsis halleri
Araha.8907s0004 0.5kb downstream 0.5kb downstream 1716 true Scaffold8907: 29300-31015 Arabidopsis halleri
Araha.8907s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold8907: 30516-31015 Arabidopsis halleri
Araha.8907s0004 1.0kb upstream 1.0kb upstream 2216 true Scaffold8907: 28300-30515 Arabidopsis halleri
Araha.8907s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold8907: 28300-29299 Arabidopsis halleri
Araha.8907s0004 1.0kb downstream 1.0kb downstream 2216 true Scaffold8907: 29300-31515 Arabidopsis halleri
Araha.8907s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold8907: 30516-31515 Arabidopsis halleri
Araha.8907s0004 2.0kb upstream 2.0kb upstream 3216 true Scaffold8907: 27300-30515 Arabidopsis halleri
Araha.8907s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold8907: 27300-29299 Arabidopsis halleri
Araha.8907s0004 2.0kb downstream 2.0kb downstream 2403 true Scaffold8907: 29300-31702 Arabidopsis halleri
Araha.8907s0004 2.0kb downstream 2.0kb downstream 1187 false Scaffold8907: 30516-31702 Arabidopsis halleri
Araha.8907s0004 5.0kb upstream 5.0kb upstream 6216 true Scaffold8907: 24300-30515 Arabidopsis halleri
Araha.8907s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold8907: 24300-29299 Arabidopsis halleri
Araha.8907s0004 5.0kb downstream 5.0kb downstream 2403 true Scaffold8907: 29300-31702 Arabidopsis halleri
Araha.8907s0004 5.0kb downstream 5.0kb downstream 1187 false Scaffold8907: 30516-31702 Arabidopsis halleri
Araha.8907s0004 10.0kb upstream 10.0kb upstream 11216 true Scaffold8907: 19300-30515 Arabidopsis halleri
Araha.8907s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold8907: 19300-29299 Arabidopsis halleri
Araha.8907s0004 10.0kb downstream 10.0kb downstream 2403 true Scaffold8907: 29300-31702 Arabidopsis halleri
Araha.8907s0004 10.0kb downstream 10.0kb downstream 1187 false Scaffold8907: 30516-31702 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040894 5273 Angiosperm View MSA
122378433 5261 Brassicaceae View MSA
123832793 5264 Brassicales-Malvales View MSA
124345980 5266 SBM View MSA
124237525 5268 Malvidae View MSA
124067317 5270 Rosid View MSA
123739119 5271 Pentapetalae View MSA
122792428 5272 Eudicot View MSA
121345574 5274 Embryophyte View MSA
123424103 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain