Gene : Araha.29378s0001 A. halleri v1.1

Defline:  (1 of 1) PTHR31065:SF14 - PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN Genomic Order:  1
Name:  ? Araha.29378s0001 Secondary Identifier:  ? PAC:28858365

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.29378s0001 0.5kb upstream 0.5kb upstream 3556 true Scaffold29378: 6065-9620 Arabidopsis halleri
Araha.29378s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold29378: 9121-9620 Arabidopsis halleri
Araha.29378s0001 0.5kb downstream 0.5kb downstream 3556 true Scaffold29378: 5565-9120 Arabidopsis halleri
Araha.29378s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold29378: 5565-6064 Arabidopsis halleri
Araha.29378s0001 1.0kb upstream 1.0kb upstream 4056 true Scaffold29378: 6065-10120 Arabidopsis halleri
Araha.29378s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold29378: 9121-10120 Arabidopsis halleri
Araha.29378s0001 1.0kb downstream 1.0kb downstream 4056 true Scaffold29378: 5065-9120 Arabidopsis halleri
Araha.29378s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold29378: 5065-6064 Arabidopsis halleri
Araha.29378s0001 2.0kb upstream 2.0kb upstream 5056 true Scaffold29378: 6065-11120 Arabidopsis halleri
Araha.29378s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold29378: 9121-11120 Arabidopsis halleri
Araha.29378s0001 2.0kb downstream 2.0kb downstream 5056 true Scaffold29378: 4065-9120 Arabidopsis halleri
Araha.29378s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold29378: 4065-6064 Arabidopsis halleri
Araha.29378s0001 5.0kb upstream 5.0kb upstream 8041 true Scaffold29378: 6065-14105 Arabidopsis halleri
Araha.29378s0001 5.0kb upstream 5.0kb upstream 4985 false Scaffold29378: 9121-14105 Arabidopsis halleri
Araha.29378s0001 5.0kb downstream 5.0kb downstream 8056 true Scaffold29378: 1065-9120 Arabidopsis halleri
Araha.29378s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold29378: 1065-6064 Arabidopsis halleri
Araha.29378s0001 10.0kb upstream 10.0kb upstream 8041 true Scaffold29378: 6065-14105 Arabidopsis halleri
Araha.29378s0001 10.0kb upstream 10.0kb upstream 4985 false Scaffold29378: 9121-14105 Arabidopsis halleri
Araha.29378s0001 10.0kb downstream 10.0kb downstream 9120 true Scaffold29378: 1-9120 Arabidopsis halleri
Araha.29378s0001 10.0kb downstream 10.0kb downstream 6064 false Scaffold29378: 1-6064 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379537 5261 Brassicaceae View MSA
123834444 5264 Brassicales-Malvales View MSA
124339643 5266 SBM View MSA
124252918 5268 Malvidae View MSA
124068522 5270 Rosid View MSA
123747069 5271 Pentapetalae View MSA
122791391 5272 Eudicot View MSA
122044768 5273 Angiosperm View MSA
121349888 5274 Embryophyte View MSA
123428703 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain