Gene : Araha.8974s0001 A. halleri v1.1

Defline:  (1 of 2) 4.99.1.1 - Ferrochelatase / Protoheme ferro-lyase Genomic Order:  1
Name:  ? Araha.8974s0001 Secondary Identifier:  ? PAC:28855811

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri HEME-BIOSYNTHESIS-II Arabidopsis halleri pathologic  
Ahalleri PWY-5918 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.8974s0001 0.5kb upstream 0.5kb upstream 2641 true Scaffold8974: 1-2641 Arabidopsis halleri
Araha.8974s0001 0.5kb upstream 0.5kb upstream 11 false Scaffold8974: 1-11 Arabidopsis halleri
Araha.8974s0001 0.5kb downstream 0.5kb downstream 3130 true Scaffold8974: 12-3141 Arabidopsis halleri
Araha.8974s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold8974: 2642-3141 Arabidopsis halleri
Araha.8974s0001 1.0kb upstream 1.0kb upstream 2641 true Scaffold8974: 1-2641 Arabidopsis halleri
Araha.8974s0001 1.0kb upstream 1.0kb upstream 11 false Scaffold8974: 1-11 Arabidopsis halleri
Araha.8974s0001 1.0kb downstream 1.0kb downstream 3630 true Scaffold8974: 12-3641 Arabidopsis halleri
Araha.8974s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold8974: 2642-3641 Arabidopsis halleri
Araha.8974s0001 2.0kb upstream 2.0kb upstream 2641 true Scaffold8974: 1-2641 Arabidopsis halleri
Araha.8974s0001 2.0kb upstream 2.0kb upstream 11 false Scaffold8974: 1-11 Arabidopsis halleri
Araha.8974s0001 2.0kb downstream 2.0kb downstream 4630 true Scaffold8974: 12-4641 Arabidopsis halleri
Araha.8974s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold8974: 2642-4641 Arabidopsis halleri
Araha.8974s0001 5.0kb upstream 5.0kb upstream 2641 true Scaffold8974: 1-2641 Arabidopsis halleri
Araha.8974s0001 5.0kb upstream 5.0kb upstream 11 false Scaffold8974: 1-11 Arabidopsis halleri
Araha.8974s0001 5.0kb downstream 5.0kb downstream 7630 true Scaffold8974: 12-7641 Arabidopsis halleri
Araha.8974s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold8974: 2642-7641 Arabidopsis halleri
Araha.8974s0001 10.0kb upstream 10.0kb upstream 2641 true Scaffold8974: 1-2641 Arabidopsis halleri
Araha.8974s0001 10.0kb upstream 10.0kb upstream 11 false Scaffold8974: 1-11 Arabidopsis halleri
Araha.8974s0001 10.0kb downstream 10.0kb downstream 12630 true Scaffold8974: 12-12641 Arabidopsis halleri
Araha.8974s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold8974: 2642-12641 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371335 5261 Brassicaceae View MSA
123834438 5264 Brassicales-Malvales View MSA
124339194 5266 SBM View MSA
124242028 5268 Malvidae View MSA
124062262 5270 Rosid View MSA
123738607 5271 Pentapetalae View MSA
122786704 5272 Eudicot View MSA
122047545 5273 Angiosperm View MSA
121310756 5274 Embryophyte View MSA
123426598 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain