Gene : Araha.9231s0001 A. halleri v1.1
Defline:  (1 of 2) 2.1.1.114 - Polyprenyldihydroxybenzoate methyltransferase / Dihydroxyhexaprenylbenzoate methyltransferase Genomic Order:  1
Name:  ? Araha.9231s0001 Secondary Identifier:  ? PAC:28839483
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-5871 Arabidopsis halleri pathologic  
Ahalleri PWY-5872 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.9231s0001 0.5kb upstream 0.5kb upstream 3229 true Scaffold9231: 1-3229 Arabidopsis halleri
Araha.9231s0001 0.5kb upstream 0.5kb upstream 432 false Scaffold9231: 1-432 Arabidopsis halleri
Araha.9231s0001 0.5kb downstream 0.5kb downstream 3297 true Scaffold9231: 433-3729 Arabidopsis halleri
Araha.9231s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold9231: 3230-3729 Arabidopsis halleri
Araha.9231s0001 1.0kb upstream 1.0kb upstream 3229 true Scaffold9231: 1-3229 Arabidopsis halleri
Araha.9231s0001 1.0kb upstream 1.0kb upstream 432 false Scaffold9231: 1-432 Arabidopsis halleri
Araha.9231s0001 1.0kb downstream 1.0kb downstream 3797 true Scaffold9231: 433-4229 Arabidopsis halleri
Araha.9231s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold9231: 3230-4229 Arabidopsis halleri
Araha.9231s0001 2.0kb upstream 2.0kb upstream 3229 true Scaffold9231: 1-3229 Arabidopsis halleri
Araha.9231s0001 2.0kb upstream 2.0kb upstream 432 false Scaffold9231: 1-432 Arabidopsis halleri
Araha.9231s0001 2.0kb downstream 2.0kb downstream 4797 true Scaffold9231: 433-5229 Arabidopsis halleri
Araha.9231s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold9231: 3230-5229 Arabidopsis halleri
Araha.9231s0001 5.0kb upstream 5.0kb upstream 3229 true Scaffold9231: 1-3229 Arabidopsis halleri
Araha.9231s0001 5.0kb upstream 5.0kb upstream 432 false Scaffold9231: 1-432 Arabidopsis halleri
Araha.9231s0001 5.0kb downstream 5.0kb downstream 7797 true Scaffold9231: 433-8229 Arabidopsis halleri
Araha.9231s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold9231: 3230-8229 Arabidopsis halleri
Araha.9231s0001 10.0kb upstream 10.0kb upstream 3229 true Scaffold9231: 1-3229 Arabidopsis halleri
Araha.9231s0001 10.0kb upstream 10.0kb upstream 432 false Scaffold9231: 1-432 Arabidopsis halleri
Araha.9231s0001 10.0kb downstream 10.0kb downstream 12797 true Scaffold9231: 433-13229 Arabidopsis halleri
Araha.9231s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold9231: 3230-13229 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363883 5261 Brassicaceae View MSA
123830048 5264 Brassicales-Malvales View MSA
124346626 5266 SBM View MSA
124241228 5268 Malvidae View MSA
124065361 5270 Rosid View MSA
123737741 5271 Pentapetalae View MSA
122789553 5272 Eudicot View MSA
122041744 5273 Angiosperm View MSA
121347606 5274 Embryophyte View MSA
123380579 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain