Gene : Araha.30937s0001 A. halleri v1.1
Defline:  (1 of 4) 2.3.3.1 - Citrate (Si)-synthase / Citrate oxaloacetate-lyase ((pro-3S)-CH(2)COO->acetyl-CoA) Genomic Order:  1
Name:  ? Araha.30937s0001 Secondary Identifier:  ? PAC:28851308
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri GLYOXYLATE-BYPASS Arabidopsis halleri pathologic  
Ahalleri PWY-5464 Arabidopsis halleri pathologic  
Ahalleri PWY-561 Arabidopsis halleri pathologic  
Ahalleri PWY-5690 Arabidopsis halleri pathologic  
Ahalleri PWY-6549 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.30937s0001 0.5kb upstream 0.5kb upstream 3808 true Scaffold30937: 1011-4818 Arabidopsis halleri
Araha.30937s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold30937: 4319-4818 Arabidopsis halleri
Araha.30937s0001 0.5kb downstream 0.5kb downstream 3808 true Scaffold30937: 511-4318 Arabidopsis halleri
Araha.30937s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold30937: 511-1010 Arabidopsis halleri
Araha.30937s0001 1.0kb upstream 1.0kb upstream 4308 true Scaffold30937: 1011-5318 Arabidopsis halleri
Araha.30937s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold30937: 4319-5318 Arabidopsis halleri
Araha.30937s0001 1.0kb downstream 1.0kb downstream 4308 true Scaffold30937: 11-4318 Arabidopsis halleri
Araha.30937s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold30937: 11-1010 Arabidopsis halleri
Araha.30937s0001 2.0kb upstream 2.0kb upstream 4503 true Scaffold30937: 1011-5513 Arabidopsis halleri
Araha.30937s0001 2.0kb upstream 2.0kb upstream 1195 false Scaffold30937: 4319-5513 Arabidopsis halleri
Araha.30937s0001 2.0kb downstream 2.0kb downstream 4318 true Scaffold30937: 1-4318 Arabidopsis halleri
Araha.30937s0001 2.0kb downstream 2.0kb downstream 1010 false Scaffold30937: 1-1010 Arabidopsis halleri
Araha.30937s0001 5.0kb upstream 5.0kb upstream 4503 true Scaffold30937: 1011-5513 Arabidopsis halleri
Araha.30937s0001 5.0kb upstream 5.0kb upstream 1195 false Scaffold30937: 4319-5513 Arabidopsis halleri
Araha.30937s0001 5.0kb downstream 5.0kb downstream 4318 true Scaffold30937: 1-4318 Arabidopsis halleri
Araha.30937s0001 5.0kb downstream 5.0kb downstream 1010 false Scaffold30937: 1-1010 Arabidopsis halleri
Araha.30937s0001 10.0kb upstream 10.0kb upstream 4503 true Scaffold30937: 1011-5513 Arabidopsis halleri
Araha.30937s0001 10.0kb upstream 10.0kb upstream 1195 false Scaffold30937: 4319-5513 Arabidopsis halleri
Araha.30937s0001 10.0kb downstream 10.0kb downstream 4318 true Scaffold30937: 1-4318 Arabidopsis halleri
Araha.30937s0001 10.0kb downstream 10.0kb downstream 1010 false Scaffold30937: 1-1010 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041314 5273 Angiosperm View MSA
122368215 5261 Brassicaceae View MSA
123799513 5264 Brassicales-Malvales View MSA
124297025 5266 SBM View MSA
124250397 5268 Malvidae View MSA
124068700 5270 Rosid View MSA
123737684 5271 Pentapetalae View MSA
122792616 5272 Eudicot View MSA
121345226 5274 Embryophyte View MSA
123424186 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain