Gene : Araha.30916s0001 A. halleri v1.1
Defline:  (1 of 1) PTHR12358:SF43 - SPHINGOID LONG-CHAIN BASES KINASE 2, MITOCHONDRIAL Genomic Order:  1
Name:  ? Araha.30916s0001 Secondary Identifier:  ? PAC:28854273
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-7039 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.30916s0001 0.5kb upstream 0.5kb upstream 1928 true Scaffold30916: 1-1928 Arabidopsis halleri
Araha.30916s0001 0.5kb upstream 0.5kb upstream 15 false Scaffold30916: 1-15 Arabidopsis halleri
Araha.30916s0001 0.5kb downstream 0.5kb downstream 2413 true Scaffold30916: 16-2428 Arabidopsis halleri
Araha.30916s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold30916: 1929-2428 Arabidopsis halleri
Araha.30916s0001 1.0kb upstream 1.0kb upstream 1928 true Scaffold30916: 1-1928 Arabidopsis halleri
Araha.30916s0001 1.0kb upstream 1.0kb upstream 15 false Scaffold30916: 1-15 Arabidopsis halleri
Araha.30916s0001 1.0kb downstream 1.0kb downstream 2913 true Scaffold30916: 16-2928 Arabidopsis halleri
Araha.30916s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold30916: 1929-2928 Arabidopsis halleri
Araha.30916s0001 2.0kb upstream 2.0kb upstream 1928 true Scaffold30916: 1-1928 Arabidopsis halleri
Araha.30916s0001 2.0kb upstream 2.0kb upstream 15 false Scaffold30916: 1-15 Arabidopsis halleri
Araha.30916s0001 2.0kb downstream 2.0kb downstream 3913 true Scaffold30916: 16-3928 Arabidopsis halleri
Araha.30916s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold30916: 1929-3928 Arabidopsis halleri
Araha.30916s0001 5.0kb upstream 5.0kb upstream 1928 true Scaffold30916: 1-1928 Arabidopsis halleri
Araha.30916s0001 5.0kb upstream 5.0kb upstream 15 false Scaffold30916: 1-15 Arabidopsis halleri
Araha.30916s0001 5.0kb downstream 5.0kb downstream 6913 true Scaffold30916: 16-6928 Arabidopsis halleri
Araha.30916s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold30916: 1929-6928 Arabidopsis halleri
Araha.30916s0001 10.0kb upstream 10.0kb upstream 1928 true Scaffold30916: 1-1928 Arabidopsis halleri
Araha.30916s0001 10.0kb upstream 10.0kb upstream 15 false Scaffold30916: 1-15 Arabidopsis halleri
Araha.30916s0001 10.0kb downstream 10.0kb downstream 10947 true Scaffold30916: 16-10962 Arabidopsis halleri
Araha.30916s0001 10.0kb downstream 10.0kb downstream 9034 false Scaffold30916: 1929-10962 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379587 5261 Brassicaceae View MSA
123830792 5264 Brassicales-Malvales View MSA
124343149 5266 SBM View MSA
124237255 5268 Malvidae View MSA
124062992 5270 Rosid View MSA
123747106 5271 Pentapetalae View MSA
122789016 5272 Eudicot View MSA
122043667 5273 Angiosperm View MSA
121344203 5274 Embryophyte View MSA
123380000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain