Gene : Araha.9182s0013 A. halleri v1.1

Defline:  (1 of 12) 2.4.2.39 - Xyloglucan 6-xylosyltransferase / Xyloglucan 6-alpha-D-xylosyltransferase Genomic Order:  13
Name:  ? Araha.9182s0013 Secondary Identifier:  ? PAC:28848620

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-5936 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.9182s0013 0.5kb upstream 0.5kb upstream 2190 true Scaffold9182: 53755-55944 Arabidopsis halleri
Araha.9182s0013 0.5kb upstream 0.5kb upstream 97 false Scaffold9182: 55848-55944 Arabidopsis halleri
Araha.9182s0013 0.5kb downstream 0.5kb downstream 2593 true Scaffold9182: 53255-55847 Arabidopsis halleri
Araha.9182s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold9182: 53255-53754 Arabidopsis halleri
Araha.9182s0013 1.0kb upstream 1.0kb upstream 2190 true Scaffold9182: 53755-55944 Arabidopsis halleri
Araha.9182s0013 1.0kb upstream 1.0kb upstream 97 false Scaffold9182: 55848-55944 Arabidopsis halleri
Araha.9182s0013 1.0kb downstream 1.0kb downstream 3093 true Scaffold9182: 52755-55847 Arabidopsis halleri
Araha.9182s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold9182: 52755-53754 Arabidopsis halleri
Araha.9182s0013 2.0kb upstream 2.0kb upstream 2190 true Scaffold9182: 53755-55944 Arabidopsis halleri
Araha.9182s0013 2.0kb upstream 2.0kb upstream 97 false Scaffold9182: 55848-55944 Arabidopsis halleri
Araha.9182s0013 2.0kb downstream 2.0kb downstream 4093 true Scaffold9182: 51755-55847 Arabidopsis halleri
Araha.9182s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold9182: 51755-53754 Arabidopsis halleri
Araha.9182s0013 5.0kb upstream 5.0kb upstream 2190 true Scaffold9182: 53755-55944 Arabidopsis halleri
Araha.9182s0013 5.0kb upstream 5.0kb upstream 97 false Scaffold9182: 55848-55944 Arabidopsis halleri
Araha.9182s0013 5.0kb downstream 5.0kb downstream 7093 true Scaffold9182: 48755-55847 Arabidopsis halleri
Araha.9182s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold9182: 48755-53754 Arabidopsis halleri
Araha.9182s0013 10.0kb upstream 10.0kb upstream 2190 true Scaffold9182: 53755-55944 Arabidopsis halleri
Araha.9182s0013 10.0kb upstream 10.0kb upstream 97 false Scaffold9182: 55848-55944 Arabidopsis halleri
Araha.9182s0013 10.0kb downstream 10.0kb downstream 12093 true Scaffold9182: 43755-55847 Arabidopsis halleri
Araha.9182s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold9182: 43755-53754 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378402 5261 Brassicaceae View MSA
123833472 5264 Brassicales-Malvales View MSA
124339455 5266 SBM View MSA
124245005 5268 Malvidae View MSA
124064369 5270 Rosid View MSA
123736946 5271 Pentapetalae View MSA
122789380 5272 Eudicot View MSA
122042255 5273 Angiosperm View MSA
121349054 5274 Embryophyte View MSA
123428220 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain