Gene : Araha.9221s0001 A. halleri v1.1
Defline:  (1 of 3) PTHR34058:SF1 - OXYGEN-EVOLVING ENHANCER PROTEIN 1-1, CHLOROPLASTIC-RELATED Genomic Order:  1
Name:  ? Araha.9221s0001 Secondary Identifier:  ? PAC:28850815
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PHOTOALL-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-101 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.9221s0001 0.5kb upstream 0.5kb upstream 1324 true Scaffold9221: 47-1370 Arabidopsis halleri
Araha.9221s0001 0.5kb upstream 0.5kb upstream 2 false Scaffold9221: 1369-1370 Arabidopsis halleri
Araha.9221s0001 0.5kb downstream 0.5kb downstream 1368 true Scaffold9221: 1-1368 Arabidopsis halleri
Araha.9221s0001 0.5kb downstream 0.5kb downstream 46 false Scaffold9221: 1-46 Arabidopsis halleri
Araha.9221s0001 1.0kb upstream 1.0kb upstream 1324 true Scaffold9221: 47-1370 Arabidopsis halleri
Araha.9221s0001 1.0kb upstream 1.0kb upstream 2 false Scaffold9221: 1369-1370 Arabidopsis halleri
Araha.9221s0001 1.0kb downstream 1.0kb downstream 1368 true Scaffold9221: 1-1368 Arabidopsis halleri
Araha.9221s0001 1.0kb downstream 1.0kb downstream 46 false Scaffold9221: 1-46 Arabidopsis halleri
Araha.9221s0001 2.0kb upstream 2.0kb upstream 1324 true Scaffold9221: 47-1370 Arabidopsis halleri
Araha.9221s0001 2.0kb upstream 2.0kb upstream 2 false Scaffold9221: 1369-1370 Arabidopsis halleri
Araha.9221s0001 2.0kb downstream 2.0kb downstream 1368 true Scaffold9221: 1-1368 Arabidopsis halleri
Araha.9221s0001 2.0kb downstream 2.0kb downstream 46 false Scaffold9221: 1-46 Arabidopsis halleri
Araha.9221s0001 5.0kb upstream 5.0kb upstream 1324 true Scaffold9221: 47-1370 Arabidopsis halleri
Araha.9221s0001 5.0kb upstream 5.0kb upstream 2 false Scaffold9221: 1369-1370 Arabidopsis halleri
Araha.9221s0001 5.0kb downstream 5.0kb downstream 1368 true Scaffold9221: 1-1368 Arabidopsis halleri
Araha.9221s0001 5.0kb downstream 5.0kb downstream 46 false Scaffold9221: 1-46 Arabidopsis halleri
Araha.9221s0001 10.0kb upstream 10.0kb upstream 1324 true Scaffold9221: 47-1370 Arabidopsis halleri
Araha.9221s0001 10.0kb upstream 10.0kb upstream 2 false Scaffold9221: 1369-1370 Arabidopsis halleri
Araha.9221s0001 10.0kb downstream 10.0kb downstream 1368 true Scaffold9221: 1-1368 Arabidopsis halleri
Araha.9221s0001 10.0kb downstream 10.0kb downstream 46 false Scaffold9221: 1-46 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364406 5261 Brassicaceae View MSA
123840363 5264 Brassicales-Malvales View MSA
124341777 5266 SBM View MSA
124237212 5268 Malvidae View MSA
124063467 5270 Rosid View MSA
123739417 5271 Pentapetalae View MSA
122788254 5272 Eudicot View MSA
122047967 5273 Angiosperm View MSA
121344212 5274 Embryophyte View MSA
123425295 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain