Gene : Araha.9128s0006 A. halleri v1.1
Defline:  (1 of 3) PTHR12741:SF9 - CALLOSE SYNTHASE 1-RELATED Genomic Order:  6
Name:  ? Araha.9128s0006 Secondary Identifier:  ? PAC:28858454
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-6773 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.9128s0006 0.5kb upstream 0.5kb upstream 12375 true Scaffold9128: 37000-49374 Arabidopsis halleri
Araha.9128s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold9128: 48875-49374 Arabidopsis halleri
Araha.9128s0006 0.5kb downstream 0.5kb downstream 12375 true Scaffold9128: 36500-48874 Arabidopsis halleri
Araha.9128s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold9128: 36500-36999 Arabidopsis halleri
Araha.9128s0006 1.0kb upstream 1.0kb upstream 12875 true Scaffold9128: 37000-49874 Arabidopsis halleri
Araha.9128s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold9128: 48875-49874 Arabidopsis halleri
Araha.9128s0006 1.0kb downstream 1.0kb downstream 12875 true Scaffold9128: 36000-48874 Arabidopsis halleri
Araha.9128s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold9128: 36000-36999 Arabidopsis halleri
Araha.9128s0006 2.0kb upstream 2.0kb upstream 13875 true Scaffold9128: 37000-50874 Arabidopsis halleri
Araha.9128s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold9128: 48875-50874 Arabidopsis halleri
Araha.9128s0006 2.0kb downstream 2.0kb downstream 13875 true Scaffold9128: 35000-48874 Arabidopsis halleri
Araha.9128s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold9128: 35000-36999 Arabidopsis halleri
Araha.9128s0006 5.0kb upstream 5.0kb upstream 14477 true Scaffold9128: 37000-51476 Arabidopsis halleri
Araha.9128s0006 5.0kb upstream 5.0kb upstream 2602 false Scaffold9128: 48875-51476 Arabidopsis halleri
Araha.9128s0006 5.0kb downstream 5.0kb downstream 16875 true Scaffold9128: 32000-48874 Arabidopsis halleri
Araha.9128s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold9128: 32000-36999 Arabidopsis halleri
Araha.9128s0006 10.0kb upstream 10.0kb upstream 14477 true Scaffold9128: 37000-51476 Arabidopsis halleri
Araha.9128s0006 10.0kb upstream 10.0kb upstream 2602 false Scaffold9128: 48875-51476 Arabidopsis halleri
Araha.9128s0006 10.0kb downstream 10.0kb downstream 21875 true Scaffold9128: 27000-48874 Arabidopsis halleri
Araha.9128s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold9128: 27000-36999 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368152 5261 Brassicaceae View MSA
123839763 5264 Brassicales-Malvales View MSA
124346959 5266 SBM View MSA
124251802 5268 Malvidae View MSA
124072639 5270 Rosid View MSA
123745171 5271 Pentapetalae View MSA
122788947 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain