Gene : Araha.31886s0001 A. halleri v1.1
Defline:  (1 of 1) PF01398//PF08082//PF08084//PF10596//PF10597//PF12134 - JAB1/Mov34/MPN/PAD-1 ubiquitin protease (JAB) // PRO8NT (NUC069), PrP8 N-terminal domain (PRO8NT) // PROCT (NUC072) domain (PROCT) // U6-snRNA interacting domain of PrP8 (U6-snRNA_bdg) // U5-snRNA binding site 2 of PrP8 (U5_2-snRNA_bdg) // PRP8 domain IV core (PRP8_domainIV) Genomic Order:  1
Name:  ? Araha.31886s0001 Secondary Identifier:  ? PAC:28855634
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.31886s0001 0.5kb upstream 0.5kb upstream 7079 true Scaffold31886: 5046-12124 Arabidopsis halleri
Araha.31886s0001 0.5kb upstream 0.5kb upstream 5 false Scaffold31886: 12120-12124 Arabidopsis halleri
Araha.31886s0001 0.5kb downstream 0.5kb downstream 7574 true Scaffold31886: 4546-12119 Arabidopsis halleri
Araha.31886s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold31886: 4546-5045 Arabidopsis halleri
Araha.31886s0001 1.0kb upstream 1.0kb upstream 7079 true Scaffold31886: 5046-12124 Arabidopsis halleri
Araha.31886s0001 1.0kb upstream 1.0kb upstream 5 false Scaffold31886: 12120-12124 Arabidopsis halleri
Araha.31886s0001 1.0kb downstream 1.0kb downstream 8074 true Scaffold31886: 4046-12119 Arabidopsis halleri
Araha.31886s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold31886: 4046-5045 Arabidopsis halleri
Araha.31886s0001 2.0kb upstream 2.0kb upstream 7079 true Scaffold31886: 5046-12124 Arabidopsis halleri
Araha.31886s0001 2.0kb upstream 2.0kb upstream 5 false Scaffold31886: 12120-12124 Arabidopsis halleri
Araha.31886s0001 2.0kb downstream 2.0kb downstream 9074 true Scaffold31886: 3046-12119 Arabidopsis halleri
Araha.31886s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold31886: 3046-5045 Arabidopsis halleri
Araha.31886s0001 5.0kb upstream 5.0kb upstream 7079 true Scaffold31886: 5046-12124 Arabidopsis halleri
Araha.31886s0001 5.0kb upstream 5.0kb upstream 5 false Scaffold31886: 12120-12124 Arabidopsis halleri
Araha.31886s0001 5.0kb downstream 5.0kb downstream 12074 true Scaffold31886: 46-12119 Arabidopsis halleri
Araha.31886s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold31886: 46-5045 Arabidopsis halleri
Araha.31886s0001 10.0kb upstream 10.0kb upstream 7079 true Scaffold31886: 5046-12124 Arabidopsis halleri
Araha.31886s0001 10.0kb upstream 10.0kb upstream 5 false Scaffold31886: 12120-12124 Arabidopsis halleri
Araha.31886s0001 10.0kb downstream 10.0kb downstream 12119 true Scaffold31886: 1-12119 Arabidopsis halleri
Araha.31886s0001 10.0kb downstream 10.0kb downstream 5045 false Scaffold31886: 1-5045 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121486631 5273 Angiosperm Singleton cluster - no MSA
122320351 5261 Brassicaceae Singleton cluster - no MSA
123761951 5264 Brassicales-Malvales Singleton cluster - no MSA
124260586 5266 SBM Singleton cluster - no MSA
124117207 5268 Malvidae Singleton cluster - no MSA
123846599 5270 Rosid Singleton cluster - no MSA
123432880 5271 Pentapetalae Singleton cluster - no MSA
122468500 5272 Eudicot Singleton cluster - no MSA
120760025 5274 Embryophyte Singleton cluster - no MSA
122802484 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain