Gene : Araha.31530s0002 A. halleri v1.1

Defline:  (1 of 1) PF04450 - Peptidase of plants and bacteria (BSP) Genomic Order:  2
Name:  ? Araha.31530s0002 Secondary Identifier:  ? PAC:28838315

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.31530s0002 0.5kb upstream 0.5kb upstream 1426 true Scaffold31530: 12431-13856 Arabidopsis halleri
Araha.31530s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold31530: 12431-12930 Arabidopsis halleri
Araha.31530s0002 0.5kb downstream 0.5kb downstream 1426 true Scaffold31530: 12931-14356 Arabidopsis halleri
Araha.31530s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold31530: 13857-14356 Arabidopsis halleri
Araha.31530s0002 1.0kb upstream 1.0kb upstream 1926 true Scaffold31530: 11931-13856 Arabidopsis halleri
Araha.31530s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold31530: 11931-12930 Arabidopsis halleri
Araha.31530s0002 1.0kb downstream 1.0kb downstream 1926 true Scaffold31530: 12931-14856 Arabidopsis halleri
Araha.31530s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold31530: 13857-14856 Arabidopsis halleri
Araha.31530s0002 2.0kb upstream 2.0kb upstream 2926 true Scaffold31530: 10931-13856 Arabidopsis halleri
Araha.31530s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold31530: 10931-12930 Arabidopsis halleri
Araha.31530s0002 2.0kb downstream 2.0kb downstream 2926 true Scaffold31530: 12931-15856 Arabidopsis halleri
Araha.31530s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold31530: 13857-15856 Arabidopsis halleri
Araha.31530s0002 5.0kb upstream 5.0kb upstream 5926 true Scaffold31530: 7931-13856 Arabidopsis halleri
Araha.31530s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold31530: 7931-12930 Arabidopsis halleri
Araha.31530s0002 5.0kb downstream 5.0kb downstream 5368 true Scaffold31530: 12931-18298 Arabidopsis halleri
Araha.31530s0002 5.0kb downstream 5.0kb downstream 4442 false Scaffold31530: 13857-18298 Arabidopsis halleri
Araha.31530s0002 10.0kb upstream 10.0kb upstream 10926 true Scaffold31530: 2931-13856 Arabidopsis halleri
Araha.31530s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold31530: 2931-12930 Arabidopsis halleri
Araha.31530s0002 10.0kb downstream 10.0kb downstream 5368 true Scaffold31530: 12931-18298 Arabidopsis halleri
Araha.31530s0002 10.0kb downstream 10.0kb downstream 4442 false Scaffold31530: 13857-18298 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373074 5261 Brassicaceae View MSA
123833762 5264 Brassicales-Malvales View MSA
124345921 5266 SBM View MSA
124238439 5268 Malvidae View MSA
124062491 5270 Rosid View MSA
123748225 5271 Pentapetalae View MSA
122793503 5272 Eudicot View MSA
122049150 5273 Angiosperm View MSA
121350945 5274 Embryophyte View MSA
123381943 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain