Gene : Araha.32204s0002 A. halleri v1.1

Defline:  (1 of 8) PF05097 - Protein of unknown function (DUF688) (DUF688) Genomic Order:  2
Name:  ? Araha.32204s0002 Secondary Identifier:  ? PAC:28852751

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.32204s0002 0.5kb upstream 0.5kb upstream 1800 true Scaffold32204: 4129-5928 Arabidopsis halleri
Araha.32204s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold32204: 5429-5928 Arabidopsis halleri
Araha.32204s0002 0.5kb downstream 0.5kb downstream 1800 true Scaffold32204: 3629-5428 Arabidopsis halleri
Araha.32204s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold32204: 3629-4128 Arabidopsis halleri
Araha.32204s0002 1.0kb upstream 1.0kb upstream 2300 true Scaffold32204: 4129-6428 Arabidopsis halleri
Araha.32204s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold32204: 5429-6428 Arabidopsis halleri
Araha.32204s0002 1.0kb downstream 1.0kb downstream 2300 true Scaffold32204: 3129-5428 Arabidopsis halleri
Araha.32204s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold32204: 3129-4128 Arabidopsis halleri
Araha.32204s0002 2.0kb upstream 2.0kb upstream 3300 true Scaffold32204: 4129-7428 Arabidopsis halleri
Araha.32204s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold32204: 5429-7428 Arabidopsis halleri
Araha.32204s0002 2.0kb downstream 2.0kb downstream 3300 true Scaffold32204: 2129-5428 Arabidopsis halleri
Araha.32204s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold32204: 2129-4128 Arabidopsis halleri
Araha.32204s0002 5.0kb upstream 5.0kb upstream 6300 true Scaffold32204: 4129-10428 Arabidopsis halleri
Araha.32204s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold32204: 5429-10428 Arabidopsis halleri
Araha.32204s0002 5.0kb downstream 5.0kb downstream 5428 true Scaffold32204: 1-5428 Arabidopsis halleri
Araha.32204s0002 5.0kb downstream 5.0kb downstream 4128 false Scaffold32204: 1-4128 Arabidopsis halleri
Araha.32204s0002 10.0kb upstream 10.0kb upstream 10219 true Scaffold32204: 4129-14347 Arabidopsis halleri
Araha.32204s0002 10.0kb upstream 10.0kb upstream 8919 false Scaffold32204: 5429-14347 Arabidopsis halleri
Araha.32204s0002 10.0kb downstream 10.0kb downstream 5428 true Scaffold32204: 1-5428 Arabidopsis halleri
Araha.32204s0002 10.0kb downstream 10.0kb downstream 4128 false Scaffold32204: 1-4128 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360760 5261 Brassicaceae View MSA
123840152 5264 Brassicales-Malvales View MSA
124342129 5266 SBM View MSA
124253586 5268 Malvidae View MSA
124064528 5270 Rosid View MSA
123742018 5271 Pentapetalae View MSA
122787181 5272 Eudicot View MSA
122047790 5273 Angiosperm View MSA
121310794 5274 Embryophyte View MSA
123348192 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain